Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_09035
Help
Entry
BG454_09035 CDS
T05218
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Pathway
rbg00550
Peptidoglycan biosynthesis
rbg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BG454_09035 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rbg01002
]
BG454_09035 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbg01011
]
BG454_09035 (dacB)
Enzymes [BR:
rbg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BG454_09035 (dacB)
Peptidases and inhibitors [BR:
rbg01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
BG454_09035 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
rbg01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
BG454_09035 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
TM_PetC
LT-IIB
Motif
Other DBs
NCBI-ProteinID:
ATX67787
UniProt:
A0A2K8KEB6
LinkDB
All DBs
Position
1886968..1888434
Genome browser
AA seq
488 aa
AA seq
DB search
MLHRRRLLNLLMGGAAMMAMPACANAPERSIRPALKPAPPVEGIVARSALGGELAFAVID
MQSGNLLEGQGANTALPPASVAKAMTALYALEALGAGYQFRTRLVATGPVSDGVLRGDLV
LAGGGDPTLDTDMLAAMAAELVRGGVRQVTGKFLVWGGALPFVEAIADDQSVQAGYNPSV
SGMNLNYNRVHFEWQRAGSDYSVSMDARSNRHRPAVSMAQMQVANRSSPLYTYRRTAVQD
QWSVARSALGNSGSRWLPVRHPELYAGEVFRGLAQVQGLALPAPEITRNAPAGQDLVTHR
SEPLQAMLRDMLRFSTNLSAEAIGMTASAARQGRPASLGASAAQMSDWARMRFGMSSARM
VDHSGLGADSRVSMTDLANMFRLSGQDGALRAILREHPFRDASGNLRPRTDMDVRAKTGT
LYFVSALGGYLRAPGGRDLAFAICSADLARRARVAGGQVDRPEGTAAWSQQARLMKQELL
LRWAQAHS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatcggcgcagactcctgaatctcttgatgggtggggctgcgatgatggcgatg
cctgcctgcgccaacgcgcccgaacgctcgatccgtccggcattgaaacccgccccccct
gttgaagggatcgtggcaagatccgcgcttgggggggagctggcctttgccgtgatcgac
atgcagtcgggtaatctgttggaagggcagggtgcgaataccgcgctgccgcctgcaagt
gtcgcaaaggcgatgaccgcactttatgcgctggaggctttgggcgcagggtatcagttc
cgtacccggctggttgcgacgggacctgtcagcgatggtgtcttgcgcggcgatctggtg
ttggcaggtgggggcgacccgacacttgataccgatatgctggcggcaatggctgcggag
ttggtgcgtggcggtgtccggcaagttacgggtaagtttcttgtctggggcggtgccttg
ccctttgttgaggcgattgccgatgaccagtctgttcaggctgggtataatccatcggta
tcggggatgaatctgaattataaccgggtccatttcgaatggcagcgcgccgggtctgat
tattccgtctcgatggacgcccgatcaaaccgccatcgcccagctgtcagtatggcgcaa
atgcaggtcgccaacaggtccagcccgctttacacttatcgacgcacggccgtgcaggac
caatggagtgtcgcgcgcagtgccttgggcaattccggctctcgttggttgcctgtgcgg
catccagaactttacgcgggcgaggtgtttcgcggccttgcacaggtgcaggggctggcc
cttcctgcgcctgaaatcactcgaaatgcgcccgcaggccaagacctggtcacccatcga
tcagagccgttacaggcgatgctgcgcgatatgctgcgcttttcgaccaatctcagcgcc
gaggcaatcggcatgacggccagtgctgcacggcaggggcggcccgccagtctgggcgcg
tcggcagcgcagatgtccgattgggcgcggatgcgctttggcatgtccagtgcacgtatg
gttgaccactcagggttgggggcagattcgcgggtatcgatgaccgatcttgccaatatg
ttccggctttccggtcaggatggcgccctgcgcgcgattctgcgcgaacaccctttccgt
gacgctagtggcaacttgcgcccccggacggatatggatgtccgggcgaaaacaggcacg
ctgtatttcgtctcggccctggggggatacttgcgtgcgccgggggggcgggatctggcc
tttgccatctgctcggcggaccttgcacgccgtgcacgcgtggcgggcggtcaagttgac
cggccagaagggactgccgcctggtcgcagcaagcccgcctgatgaagcaggaattattg
cttcggtgggcgcaggcgcattcctga
DBGET
integrated database retrieval system
