Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_09610
Help
Entry
BG454_09610 CDS
T05218
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Pathway
rbg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BG454_09610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbg03021
]
BG454_09610
Transcription machinery [BR:
rbg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BG454_09610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
FTCD_C
Med21
DUF3012
EFhand_Ca_insen
DUF1451
Motif
Other DBs
NCBI-ProteinID:
ATX66049
UniProt:
A0A2K8K9C2
LinkDB
All DBs
Position
complement(2005637..2007631)
Genome browser
AA seq
664 aa
AA seq
DB search
MAAKDTDDTRIEDQENEAGQTVSQASIKKMIAQAKERGFITYEQLNQALPPDQVASEQIE
DVMSMLSEMGINIIEDDDDSEEPETKTGELVEIGGARDVTVATSSSEEKLDRTDDPVRMY
LREMGSVELLSREGEIAIAKRIEAGRNTMILGLCESPLTFQAITIWRDELLNEDVLLRDV
IDLEATFGNALEGDEDGIPVAEGLANASPAAKPERASEPELDADGNPIQKADDDDEDDDQ
SNLSLAAMEAALKPRVLETLDRIAHDFDLLSEMQEQRMNATLLEEGRFTEAQEQQYQKLR
AEIVELVNSLHLHNNRIEALVDQLYGINKRIMSIDSAMVKLADQARINRREFIDAYRGSE
LDPTWCDRMTDKPGRGWQALMDRSRDKVEELRSDMAQVGQYVGVDINEFRRFVGQVQKGE
KEARQAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFST
YATWWIRQAITRSIADQARTIRIPVHMIETINKLVRTGRQMLHEIGREPTSEELAEKLQM
PLDKVRKVMKIAKEPISLETPIGDEEDSQLGDFIEDKNALLPLDSAIQDNLRETTTRVLS
SLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRS
FLDQ
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaaagacactgacgacacacgcatcgaagatcaggaaaatgaagcggggcaa
actgtaagccaagcctctatcaagaagatgatcgcgcaagcgaaagaacgcggctttatc
acttatgaacagctgaatcaggcgttgccgccagatcaggttgcctcggaacagatcgaa
gatgtgatgtccatgctatcagagatggggatcaacatcatcgaggatgatgacgacagc
gaagaaccggaaacgaaaaccggggaactcgtcgaaatcggtggcgcgcgcgatgtaacc
gtggcgacaagctctagcgaagagaagctggatcgcacagacgaccctgtgcgcatgtat
ctgcgcgagatgggctcggtcgagttgctgtcgcgcgagggtgagattgcaatcgccaag
cgcattgaagccgggcgcaacaccatgattctgggcttgtgcgagagcccgctgaccttt
caggcgattaccatctggcgcgacgaactgttgaacgaagatgtattgctgcgtgatgtc
atcgaccttgaggcgacctttggaaatgcgctggagggcgacgaggatggcattccggta
gccgaaggtctggccaacgcaagcccggccgccaagcctgaacgcgcttcagaacccgaa
ctggatgccgatggaaacccgatccagaaggcggatgatgatgatgaggatgacgatcag
tcaaacctctctctggcggctatggaagcggccttgaaaccgcgcgtgctggaaacactg
gaccgcatcgcacatgatttcgacctgctctccgagatgcaggaacagcgcatgaatgcg
accttgctggaagaaggccgcttcaccgaagcgcaggaacagcaatatcaaaaacttcgg
gcggaaattgtggaattggtgaattcgcttcacctgcataacaaccgcattgaagcgctg
gttgaccagctttacgggatcaacaagcggatcatgtcaatcgacagcgccatggtgaag
ctggccgatcaggcgcgcatcaaccggcgcgagttcatcgacgcctatcgcgggtctgaa
ctggacccgacatggtgcgaccgcatgactgacaaacctggtcgcggctggcaggccttg
atggatcgctctcgcgacaaggttgaggaattgcgctctgatatggcgcaggttggccag
tatgttggcgtcgacataaacgaattccgccgctttgtcggacaagtgcagaaaggcgaa
aaagaagcccgccaggccaagaaggaaatgatcgaagcaaacctgcgtctggtgatctcg
atagcaaagaaatacaccaatcgtgggcttcagtttcttgacctaattcaggaaggcaat
atcggcctgatgaaggcggtcgacaagttcgaataccgtcgcggctacaagttcagcacc
tatgcgacgtggtggatccggcaggcgattacccgctcgatcgcagaccaggcccgcacg
atccgcattccggttcatatgatcgaaacgatcaacaagctggtgcgcacagggcggcag
atgctgcatgaaattggccgcgaaccaacctctgaggaattggctgaaaagctacaaatg
ccactggataaagtgcgcaaggtgatgaaaatcgccaaagagccaatctcgctggaaacg
cccatcggtgacgaggaggacagccagcttggcgatttcatcgaggacaagaacgcgctt
ttgccgcttgattccgccattcaggacaacctgcgcgaaacaacaacgcgcgtcctgtcc
tcgctgacaccacgcgaagagcgtgttttacgtatgcgctttgggattggtatgaacaca
gatcacacgctggaagaagtgggccagcaattcagcgtgacccgcgaacgaatcagacag
atcgaggcgaaagcactgcgaaagctcaagcacccgtcccgctcgcgcaaattgcgcagc
tttctggatcagtga
DBGET
integrated database retrieval system
