Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_13850
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Entry
BG454_13850 CDS
T05218
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Pathway
rbg03420
Nucleotide excision repair
rbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BG454_13850
03430 Mismatch repair
BG454_13850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbg03400
]
BG454_13850
Enzymes [BR:
rbg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BG454_13850
DNA repair and recombination proteins [BR:
rbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BG454_13850
MMR (mismatch excision repair)
Other MMR factors
BG454_13850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ATX66768
UniProt:
A0A2K8KIW0
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All DBs
Position
complement(2846996..2849377)
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AA seq
793 aa
AA seq
DB search
MSDFNADLPLSARAMAARPAPYLDGLNPAQRQAVETLDGPVLMLAGAGTGKTKALTARIA
HLLNSGRAYPSGILAVTFTNKAAREMKLRVGGYLGEAVEGMPWLGTFHSISAKLLRRHAE
LVGLQSNFTILDSDDQLRLLKQLIAAANIDDKRWPARLLASIIDQWKNRAWRPDQVPSAE
ANAFNNRGTELYAAYQDRLKTLNACDFGDLLLHCVTIFQAHPDVLKSYQDRFRYILVDEY
QDTNVAQYLWLRLLAEGHKNICCVGDDDQSIYGWRGAEVGNILRFERDFPGATVVRLEQN
YRSTPHILAAASQVIAGNEDRLGKTLWTEARAGEKVRLIGHWDGEEEARWIGEQIEDLSR
GTRGLNYFSLNQMAVLVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAMAYFRL
AVSPGDDLAFERIVNTPKRGLGDKAQQTIQRVARAHDVSLVQGAALAIEAGEIKGKGAGQ
LRALVENIARWHRAVGTTGVAEAEDDLIEIVRPDGDAQNHIELAEQILEESGYTEMWLND
KTPEAPGRLENLKELIKALESFENLQGFLEHIALIMDNDSDDSEAKVSIMTLHGAKGLEF
PVVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEQLCTISFAANRRVYGQWQ
SQMPSRFVDELPAEHVEVLTPPGLYGGGMGHVASTIEDRAQRADVYNSPGWRRLQSANER
PVSQPREARNMVIDGTSAPAFEIGARVFHQKFGYGRVSLVEGDKLFIEFEKSGARHVVAK
FIVPAEQADDVPF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatttcaatgccgatcttccgctttccgcccgcgcgatggccgcgcgccctgca
ccctatctggacgggttgaacccggcgcagcgtcaggctgtcgaaacactggatggcccg
gtgctgatgctggcaggggcaggcacgggcaagaccaaggccctgaccgcgcggattgcg
catctgttgaattctggccgtgcctatccttcggggattctggcagtgacctttaccaac
aaggccgcgcgcgaaatgaaactgcgcgttggcggctatctgggcgaggctgtcgagggc
atgccctggcttggaaccttccattcgatcagcgcaaaacttctgcgccgccatgcggaa
ttggtggggttgcagtccaatttcacgattctggacagtgacgaccagctacgcttgctt
aaacaattgatcgctgcggccaatatcgacgacaagcgctggcccgcgcggttgctggcg
tcaatcattgatcagtggaaaaaccgcgcatggcggcccgatcaggtgccaagcgctgag
gccaacgcgttcaacaatcgcgggacagaattatacgccgcctatcaggaccggctgaaa
accctgaatgcctgtgactttggtgatctgctgctgcattgcgtgacgatctttcaggcc
caccccgatgtgctgaaaagctatcaggaccgctttcgctatattctggtcgatgagtat
caggacaccaatgtcgcgcaatatctgtggctgcgcctgctggcggaagggcacaagaat
atttgctgtgtgggcgatgatgaccagtcgatctatggctggcgcggggccgaagtgggc
aatattctgcgctttgagcgtgatttccccggcgctaccgtcgtgcggctggaacagaat
taccgctctaccccgcatattctggccgcagcgtcgcaagtgatcgccgggaacgaggac
cggcttggcaagaccctgtggaccgaagcgcgtgcgggtgaaaaggtgcggctgatcggc
cattgggatggcgaggaagaggcgcgctggatcggcgagcagatcgaggatttgagccgc
ggcacgcgcgggttaaactacttcagcttgaaccagatggcggttcttgtgcgtgcaagc
caccagatgcgcgcgttcgaggaccgttttctgacgattggcctgccgtatcgtgtgatc
ggtgggccgcgtttttatgaacgcatggaaatccgcgatgccatggcgtatttccgcctt
gcggtcagtccgggcgatgatctggcgttcgagcgtatcgtcaatacccccaaacggggc
ttgggtgacaaggcgcagcagacaatccagcgcgtggcgcgagcgcatgatgtgtcgctg
gtccaaggtgcggcacttgcgatcgaggcgggtgagatcaagggcaagggcgcggggcaa
ttgcgcgcgctggtcgagaatatcgcgcgctggcacagggcggttggcacgacaggcgtt
gccgaggcggaagatgacctgatcgagatcgtgcgcccggacggagatgcgcaaaaccat
atcgaactggcagagcagattctggaagagtcgggctataccgagatgtggctgaacgac
aagacacccgaagcgccggggcggctggaaaacctaaaggaactgatcaaggcgctggaa
tccttcgagaacctgcaagggtttctggagcatattgcgttgatcatggataatgacagc
gatgactcagaggccaaggtcagcatcatgaccttgcatggtgccaaagggctggaattt
ccggtcgtgttcctgcccggatgggaagacggtttgttcccctcgcaacgctctatggat
gaatccgggctaaaggggttagaggaagaacggcggctggcctatgtcggcattacccgt
gccgagcagctttgcacgatcagtttcgccgcaaacaggcgcgtctatggccaatggcag
tcgcagatgccgtcgcgctttgtcgatgaattgcccgccgagcatgtcgaagtgttgacc
ccgcccggtctgtatggtggcgggatgggacatgttgccagcacgattgaagatcgcgcg
caacgtgccgatgtctataattcgccggggtggcggcggttgcaatcggccaatgaacgc
ccggtcagccaaccgcgtgaggcgcgcaatatggtgattgacgggacatccgcacccgcc
ttcgagattggggcgcgggttttccaccagaaattcggctatggccgcgtctctctggtc
gagggggacaagctgtttatcgaattcgagaaatcgggtgcgcgccatgttgtggcgaaa
ttcatcgtccctgcagaacaggccgatgacgtgccgttctga
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