Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_14320
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Entry
BG454_14320 CDS
T05218
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Pathway
rbg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BG454_14320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbg03400
]
BG454_14320
Enzymes [BR:
rbg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
BG454_14320
DNA repair and recombination proteins [BR:
rbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BG454_14320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
CENP-O
T3SS_needle_E
Motif
Other DBs
NCBI-ProteinID:
ATX66848
UniProt:
A0A2K8KJ36
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All DBs
Position
complement(2941038..2942453)
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AA seq
471 aa
AA seq
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MDLIDEPASNTPEFSVSEISGAVKRVLEGEFGRVRVRGEVGRVVVARTGHMYFDLKDDRA
VIASVSWKGQVARMAAKPEEGMEVIATGRLTTFAPQSRYQLQVESIEPAGAGALMAMLEK
RKAALAAEGLFAPERKKRLPYLPRVVGVVTSPQGAVIRDILHRLHDRFGVHVLLWPVAVQ
GQACAAEVARAIAGFNALPKGGAIPRPDVIIVARGGGSIEDLWGFNEEIVIRATAASDIP
LISAVGHETDTTLIDFASDQRAPTPSAAAEIAVPVHSDLAAGLAGLDARLIRAGAQAVSQ
RRQRLADLSRALPRAEALLAPATQRFDQWAERFPGSLRALIASKSQELRSTSAGLRANTI
RFQIDKSRERLEDRSTRAIRAMAAQLEQRATRLAALERLRQSLGYPATLQRGYAVVRDAE
GGVLTSATTAAKVTTLEIEFSDGNLVAVPQKSGKAQKPKSTPPPPQQGSLF
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggacctgattgacgaacccgccagcaacacacccgaattctcggtctccgaaatatca
ggcgcggtcaaacgcgtgctggagggggaatttggccgcgtgcgggtgcgcggcgaggtg
gggcgcgtggtcgtcgcgcgcaccgggcatatgtatttcgacctcaaggatgaccgcgcg
gtgattgccagtgtcagctggaaagggcaggtcgcgcgcatggcggccaagcccgaggag
gggatggaggtcatcgccaccggccgactgacgacatttgcaccgcaatccagataccag
cttcaagtcgaaagcatcgaacccgctggcgctggcgcgctgatggccatgctggaaaaa
cgcaaggccgcgctggccgccgaagggctgttcgcgccagagcggaagaaacgcctgccc
tatctgccgcgtgtggtgggggtggtgacttcgccgcaaggggcagtgattcgcgacatc
ctgcaccggctgcatgaccggttcggggtgcatgtgctgctctggccagtagccgtacag
gggcaggcctgcgcggcagaggtcgcgcgcgcgattgcgggcttcaatgccctgccaaag
ggcggcgcgatcccccggccagatgtgatcatcgtcgcgcgcgggggcggatcgatcgaa
gatctctgggggtttaacgaagaaattgtcatccgcgccacggcagccagcgacataccg
ctgatatcggccgtcgggcatgaaaccgacaccacgctgatcgacttcgcctctgaccag
cgcgcgccaacgccatcggctgcggctgaaattgccgtgccggtccattccgatcttgca
gccggccttgccgggctggatgcgcgcctgatccgtgcaggcgcgcaggcggtcagccaa
cgccgccagcggctggcggatctgtcgcgcgcactgccccgcgccgaagctcttcttgcc
ccggcaacgcagcgctttgaccaatgggccgaacgctttcccggatctttgcgcgcattg
attgccagcaaatcgcaagaattgcgcagcacaagtgcagggttgcgggccaacaccatc
cgtttccagatcgacaagtcccgcgaaaggctggaggatcgcagcacccgcgccatccgc
gcaatggcggcgcagcttgaacagcgtgccacccgccttgcggcactggagcggctgcgc
caatcgctgggctaccctgccacattgcaacgcggttatgcggttgtgcgcgatgcagag
gggggcgtgctcacctccgccaccacagcggccaaggtcaccacattggagattgaattt
tctgatggcaatcttgtcgcagtgccacaaaaatccggcaaggcgcaaaagccgaaatcc
acaccgcccccaccgcaacagggcagcttgttctga
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