Roseinatronobacter bogoriensis subsp. barguzinensis: BG454_18660
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Entry
BG454_18660 CDS
T05218
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
rbg
Roseinatronobacter bogoriensis subsp. barguzinensis
Pathway
rbg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BG454_18660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbg03400
]
BG454_18660
Enzymes [BR:
rbg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BG454_18660
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BG454_18660
DNA repair and recombination proteins [BR:
rbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BG454_18660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ATX67581
UniProt:
A0A2K8KDS5
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All DBs
Position
3896853..3897716
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AA seq
287 aa
AA seq
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MPELPEVETVRRGLLPAMEGQRILQAELRRDGLRWPFPADMAKRLSGAGITNLRRRSKYI
LIDLDTRESLIIHLGMSGRMVISGLKATHVPGQFHFEHPTIGKHDHVLFHMANGARVTFN
DPRRFGAMDLCATSALDAHPLLANIGPEPLSNAFHADYLANRLKGRKTPIKAALLDQRIV
AGLGNIYVCEALFRAGISPLRAAGRIGAGRIERLTDTIRATLRDAIEAGGSSLRDYRQAD
GELGYFQHSFRVYGREGAPCVTQGCPQTIRRIVQSGRSSFYCSTCQR
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaagttgaaaccgtgcgtcgcggccttttgcccgcgatggaagga
cagcgcatcctgcaagccgaattgcgccgcgatggattacgctggccctttccagccgac
atggcaaagcggctaagtggtgcgggcatcacgaatctgcgccgccgctcaaaatacatc
ctgatagatctggatacgcgcgagagcctgatcattcaccttggcatgtccgggcgcatg
gtcatttcggggctgaaggccacccatgtacccggacagttccatttcgaacacccgacc
atcggtaaacacgatcatgtcctgtttcacatggccaatggtgcgcgagtgaccttcaac
gatccgcgccgctttggggcaatggatctttgcgccaccagcgcactggacgcgcacccg
ctcttggccaatatcggccccgagccactgagcaatgcgtttcacgcagattatctggcc
aatcgcctcaaggggcgcaagacgccaatcaaggctgcattgctggatcagcgaatcgtt
gccgggctaggcaatatctatgtctgcgaggcattgtttcgcgccggaatcagcccattg
cgtgccgcaggtcggattggcgcggggcgaatcgagcgtctgaccgacacaattcgggcc
acgctgcgcgacgcgatcgaggctggcgggtccagtttgcgcgactaccggcaagccgat
ggagaacttggatattttcagcacagctttcgcgtttacgggcgcgagggcgcgccctgc
gtgacgcaaggttgcccccaaaccatacgccgcatagtgcaatctggccgctccagcttc
tactgttcgacatgccagagatga
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