Rhodocyclaceae bacterium Thauera-like: B4966_00580
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Entry
B4966_00580 CDS
T05394
Name
(GenBank) crotonase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh00071
Fatty acid degradation
rbh00280
Valine, leucine and isoleucine degradation
rbh00310
Lysine degradation
rbh00362
Benzoate degradation
rbh00380
Tryptophan metabolism
rbh00410
beta-Alanine metabolism
rbh00640
Propanoate metabolism
rbh00650
Butanoate metabolism
rbh00907
Pinene, camphor and geraniol degradation
rbh00930
Caprolactam degradation
rbh01100
Metabolic pathways
rbh01110
Biosynthesis of secondary metabolites
rbh01120
Microbial metabolism in diverse environments
rbh01200
Carbon metabolism
rbh01212
Fatty acid metabolism
Module
rbh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
B4966_00580
00650 Butanoate metabolism
B4966_00580
09103 Lipid metabolism
00071 Fatty acid degradation
B4966_00580
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
B4966_00580
00310 Lysine degradation
B4966_00580
00380 Tryptophan metabolism
B4966_00580
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
B4966_00580
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
B4966_00580
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
B4966_00580
00930 Caprolactam degradation
B4966_00580
Enzymes [BR:
rbh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
B4966_00580
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
B4966_00580
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
B4966_00580
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Pyr_redox_2
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AUL98828
UniProt:
A0A2K9LBG8
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All DBs
Position
130318..132285
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AA seq
655 aa
AA seq
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MSVSYKHWRIERDAQGLAWLWFDRAEAATNTLSAEALDELARVLSAFEAAPPAGLIIASA
KPAGFIAGADIHEFTALDKPEAARILIERGWRTFNQLAAARYPTLALVRGHCLGGGLELA
LACRYRIVVDEPSTRLALPEVMLGIVPGWGGMKRLPELVGPAVALDLMLTGKGVDAKRAQ
RLGLADECVPPRVMENAARVLVLSRRPRRRLPWTQRLLNGPLKAVVAGQARKQAAARARP
QHYPAPFAIIDIWARHGGNALAAEREMATIFGSPTAKNLVRVFFLQERLKGFGKDSDFVP
RRVHVVGAGVMGGDIAAWCALRGMTVTLQDQSVERIAPAIARANKLYEKKYRGDKRQVRF
TLDRLIPDPQGHGAAHADVIIEAIYENLDAKQALFRDLESRAKPDAVLATNTSSLRLEDI
ASALERPERLVGIHFFNPVAMMPLVEVVAGAHSDADAVKRAAAFVRAIDKLPLPVKSAPG
FLVNAVLGPYMLEALRCVEEGIAPETVDEALLAFGMPMGPIELVDTVGLDIAVAAGKALA
GDEAAQAPRKLLELVAAGHLGKKTGQGYYRWAEGKVQKGRPAAVPDGLAERVLTPLLAAV
QRCVQSKVVADADLADAGVIFGTGFAPFTGGPLNFLRQGGFGRADAAVALQAVRV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgagctacaaacactggcgtatcgagcgtgacgcgcaaggactggcctggctg
tggttcgaccgcgccgaggccgccaccaacactttgtcggccgaagcgctcgacgagctg
gcgcgggtgctgagcgctttcgaggccgcccctcccgccgggctgatcattgcttcggcc
aagcccgccggctttatcgccggtgccgatattcatgaattcactgcgctggacaagccg
gaggccgcgcgcatcctgatcgagcgcggttggcgcactttcaaccagcttgccgcggcg
cgctacccgacgcttgcgctggtgcgcggccactgcctgggcggcgggctggagctggcg
ctcgcctgccgctaccgcatcgtggtggatgagccttccacccgcttggcgctacccgag
gtgatgttgggcatcgtgcccggctggggcggcatgaagcgtctgcccgaactggtcggt
ccggccgtggcgctcgatctgatgctcaccggcaagggcgtggatgccaagcgcgcgcag
cgtctgggcctggccgacgaatgcgtgccgccgcgggtgatggaaaacgccgcacgtgtg
ctggtgctctcgcgccgtccgcgccgccgcctgccctggactcagcgcctgctcaacggt
ccgctgaaggcggtggtggctggccaagctcgcaaacaggccgcggcccgcgcccgtccc
cagcactacccggcaccgtttgcgatcatcgacatctgggcgcgccacggtggcaatgcg
cttgccgccgaacgcgagatggccaccatcttcggctcgcctaccgccaagaacctggtg
cgggtgttcttcctgcaggaacgtctgaaaggctttggcaaggacagcgactttgtcccg
cgccgggtgcatgtggtcggcgccggcgtcatgggcggcgacatcgccgcctggtgcgcg
ctgcgcggcatgacggtgacgctgcaggaccagtcggtggagcgcatcgccccggccatc
gcgcgtgccaacaagctgtacgagaagaaatatcggggcgacaagcgtcaggtgcgcttc
acgctggaccgcctgattcctgacccgcagggccacggtgcggcacatgccgacgtgatc
atcgaggcgatctacgagaacctggacgccaagcaggcgctgttccgcgacttggaatcg
cgcgccaagcccgatgcggtactggccaccaatacctccagcctgcgcctggaagacatt
gccagcgcgctcgagcggcccgagcgtctggtcggcatccatttcttcaacccggtggcg
atgatgccgttggtcgaggtggttgccggtgcgcactcggatgccgatgcggtcaaacgc
gccgcggccttcgtgcgcgccatcgacaagctgccgctgccggtcaagtctgcgccaggc
tttctggtcaacgcggtactcggtccctacatgctggaggccctgcgctgtgtcgaggaa
ggcatcgcgcccgagacggtggatgaggcgctgctggcctttggcatgccgatggggccg
atcgagctggtcgacaccgtcgggctggatatcgcggtggcagccggcaaggcgctggcg
ggcgatgaggccgcacaggcgccacgcaaactgctcgaactggttgctgcgggccatttg
ggcaagaaaaccggacagggttattaccgctgggctgagggcaaagtgcaaaagggccgt
ccggctgcggtgcccgacgggctggccgagcgtgtcctgaccccgctgcttgcggccgtg
cagcgctgtgtgcagagcaaggtggtggccgatgccgatttggccgatgctggcgtgata
ttcggtaccggctttgcgccttttaccggcggaccgctgaattttctgcgtcaaggtgga
ttcggccgcgctgatgccgctgtggccttgcaggcggtccgcgtgtag
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