Rhodocyclaceae bacterium Thauera-like: B4966_01165
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Entry
B4966_01165 CDS
T05394
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B4966_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbh03019
]
B4966_01165
03110 Chaperones and folding catalysts [BR:
rbh03110
]
B4966_01165
03029 Mitochondrial biogenesis [BR:
rbh03029
]
B4966_01165
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbh04147
]
B4966_01165
Enzymes [BR:
rbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
B4966_01165
Messenger RNA biogenesis [BR:
rbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
B4966_01165
Chaperones and folding catalysts [BR:
rbh03110
]
Heat shock proteins
HSP60 / Chaperonin
B4966_01165
Mitochondrial biogenesis [BR:
rbh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
B4966_01165
Exosome [BR:
rbh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
B4966_01165
Exosomal proteins of other body fluids (saliva and urine)
B4966_01165
Exosomal proteins of breast cancer cells
B4966_01165
Exosomal proteins of colorectal cancer cells
B4966_01165
Exosomal proteins of bladder cancer cells
B4966_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AUL98934
UniProt:
A0A2K9L7P5
LinkDB
All DBs
Position
257985..259607
Genome browser
AA seq
540 aa
AA seq
DB search
MAAKIVQFHDSARERIVRGVNILANAVKVTLGPKGRNVVLERSFGAPVITKDGVSVAKEI
ELKDKFENMGAQMVKQVASKTADVAGDGTTTATVLAQAIVAEGMKYVAAGMNPMDLKRGI
DKAVAATVEELKKLSKPCSTSKEIAQVASISANSDSDIGDIIARAMDKVGKEGVITVEDG
KSLQNELDVVEGMQFDRGYLSPYFINNPDKQIAVLDEPLVLIHDKKISSIRDLLPVLEEV
AKAGRPLLIIAEDIEGEALATLVVNSMRGVLKVAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEETGKQLEKATLADLGRAKRVEVHKETTTIIDGAGEDAKIKARVAAIQRQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVPGGGVALL
RARAALKALKGDNHDQDAGIKIVLRALEEPLRAIAANAGDEPSVVVAKVESGQGNFGYNA
ASGEYGDLVEMGVIDPTKVTRSALQNAASVAGLILTTDATVAEAPKEEKPAAPAMPEMDY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaaatcgtccagttccatgattccgcccgcgaacgcatcgtccgcggggtc
aacatcctggccaacgcggtcaaggtcaccctgggaccgaaaggccgcaacgtggtgttg
gagcgctctttcggcgcgccggtgattaccaaggacggtgtgtcggtcgccaaggaaatc
gaactcaaggacaagttcgagaacatgggcgcgcaaatggtcaagcaggttgcctccaag
accgcggatgtggccggtgacggcaccaccaccgccaccgtgctggctcaggccatcgtg
gccgagggcatgaaatatgtggcggccggcatgaatccgatggatcttaagcgcggcatc
gacaaggccgtggccgccaccgtcgaagagctgaaaaaactgtccaagccgtgctcgacc
agcaaggaaatcgcccaggtggcctcgatctcggccaactccgacagcgacatcggcgac
atcattgcccgcgccatggacaaggtgggcaaggaaggcgtgattaccgtcgaagacggc
aagtcgctgcaaaacgagctggatgtggtcgaaggcatgcagttcgaccgcggctatctg
tcgccctacttcatcaacaacccggacaagcagattgcggtgctcgatgagccgctggtg
ctgatccatgacaagaagatctccagcatccgcgatctgctgccggtgctcgaagaggtg
gccaaggccggtcgtccgctgctgatcattgccgaggatatcgaaggcgaagcgctggcc
acgctggtggtcaacagcatgcgcggcgtgctcaaggtggcggcggtcaaggcgccgggc
tttggcgaccgtcgcaaggccatgctggaggatatcgccattctgaccggcggtacggtg
atttccgaggaaaccggcaagcagctcgaaaaagccacgctcgccgacttgggccgtgcc
aagcgcgtcgaagtgcacaaggaaaccaccaccatcatcgacggcgccggcgaggatgcg
aagatcaaggcccgtgtggcggcgatccagcgtcagatcgaagaggcgacctccgactac
gaccgcgaaaaactgcaggaacgtgtggccaagctggccggtggcgtggcggtgatcaag
gtcggtgccgccaccgaagtggaaatgaaggagaagaaagaccgggtggacgatgcgctg
catgctacccgtgccgcggtcgaagaaggcatcgtgcccggcggtggcgtggcgctgctg
cgcgcccgcgctgccctcaaggcgctcaagggcgacaaccatgaccaggatgccggcatc
aagatcgtgctgcgtgcgctggaagagcccttgcgtgcgattgccgccaatgccggcgac
gagccgagcgtggtggtggccaaggtcgaaagcggccagggcaatttcggctacaacgct
gcttccggcgaatacggcgacctggtcgagatgggcgtgatcgatccgaccaaggtcacc
cgcagcgcgctgcaaaatgcggcttcggtcgcggggctgatcctcaccaccgatgccacg
gtggccgaagcgcccaaggaagaaaaaccggctgccccggccatgccggaaatggactac
tga
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