Rhodocyclaceae bacterium Thauera-like: B4966_01715
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Entry
B4966_01715 CDS
T05394
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh00300
Lysine biosynthesis
rbh00470
D-Amino acid metabolism
rbh01100
Metabolic pathways
rbh01110
Biosynthesis of secondary metabolites
rbh01120
Microbial metabolism in diverse environments
rbh01230
Biosynthesis of amino acids
Module
rbh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
B4966_01715
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
B4966_01715
Enzymes [BR:
rbh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
B4966_01715
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AUM01388
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Position
369579..370412
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AA seq
277 aa
AA seq
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MRMRFTKMHGLGNDFVVIDATREPVELTPERVRRIADRHFGVGCDQLLVVEPPSQAGVDF
RYRIFNADGGEVEQCGNGARCFVRFVHDKGLTAKREIRVETRAGIIAPRLEDDGQVTVDM
GVPVLEPARIPFLSDSDAVVQPLDVDGLMVPITAVSMGNPHAVQVVADVDAAPVAIQGPL
IERHPRFPARVNAGFMQVVSPSRIRLRVFERGAGETLACGTGACAAVVAGILRGLLRSPV
RVQTRGGELEIAWAGGDAPVMMTGPAVTVFEGEMMLA
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atacgcatgcgctttaccaagatgcacggtctaggcaacgatttcgtggtcatcgacgcg
acgcgcgaaccggtcgaactcaccccggagcgggtgcgccggatcgccgaccgccatttc
ggcgtgggctgcgatcaactgctggtggtcgagccgcccagccaggcgggtgtggatttc
cgctaccgtattttcaacgccgacggcggcgaggtggagcaatgcggcaacggcgcgcgc
tgctttgtccgcttcgtgcacgacaaaggcttgaccgccaaacgcgaaatccgtgtcgaa
acccgcgccggaatcatcgccccgcgtctggaagacgatggccaggtaaccgtggacatg
ggcgtgccggtgctggagccggcacgcattccgtttttgtccgattccgatgcggtggtg
cagccgctggacgtcgacggcctgatggtgccgattaccgcggtatcgatgggcaatccg
catgcggtgcaggtggtggccgatgtcgatgccgcaccggtggccattcaggggccgctc
atcgaacgtcatccgcgctttccggcccgggtcaacgcgggcttcatgcaggtggtgtcg
ccttcgcgcatccgcctgcgggtgttcgagcgcggcgcaggcgagactttggcctgcggc
accggcgcctgcgctgcggtggtcgccggcatcctgcgcgggctgttgcgctcgccggta
cgggtgcaaacccgcggcggcgagctggaaattgcctgggcggggggcgacgcgccggtg
atgatgaccggcccggcggtgaccgtttttgaaggcgagatgatgcttgcctga
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