Rhodocyclaceae bacterium Thauera-like: B4966_01830
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Entry
B4966_01830 CDS
T05394
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh03030
DNA replication
rbh03410
Base excision repair
rbh03420
Nucleotide excision repair
rbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B4966_01830
03410 Base excision repair
B4966_01830
03420 Nucleotide excision repair
B4966_01830
03440 Homologous recombination
B4966_01830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbh03032
]
B4966_01830
03400 DNA repair and recombination proteins [BR:
rbh03400
]
B4966_01830
Enzymes [BR:
rbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B4966_01830
DNA replication proteins [BR:
rbh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
B4966_01830
DNA repair and recombination proteins [BR:
rbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
B4966_01830
NER (nucleotide excision repair)
GGR (global genome repair) factors
B4966_01830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AUM01390
UniProt:
A0A2K9LGN3
LinkDB
All DBs
Position
390497..393205
Genome browser
AA seq
902 aa
AA seq
DB search
MPTLLLVDGSSYLYRAFHALPDLRTSAGEPTGAIRGVLAMLRRLESEYAAEYRACVFDAK
GKTFRDDLYPAYKSHRPPMPEALRAQIEPLHQAVQAEGWPLLVVEGVEADDVIGTLTRQA
VERGWQVVISTGDKDLTQLVRPGVRWVNTMSEEVLDEAGVTAKFGVPPERIVDYLALVGD
AVDNVPGVDKCGSKTAVKWLTEYGSLDNLVAHAEEIGGKIGENLRRHLDFLPLGRQLVTV
ATDVDLPVELEALHAREDDKAALRALYQRFEFRTWLKGLDDDRTPGQPLAAEENQNSRAP
SPVSYTTILDWPTFDLWLAKIDAAELTAFDTETTSLDPMAARLVGMSFATVAGEAAYLPL
THCGADAPAQLALDEVLAKLKPWLESEAKPKLGQNIKYDAHVMANYGIRLRGIVHDTLLQ
SYVLEADKPHDMDALAKRHLGLTTVSYAEVCGKGAKQIGFDQVAVARATEYAAEDADITL
RLHHRLWPQIAAEARLAALYREIEMPTLAVLLEMERNGVLIDTALLARHSEALGRRLYEL
QCQAHQLAGQPFNLGSPKQLGEILFGKLGLPVVKKTATGQPSTDEEVLEKLAEDYPLPKL
LLEHRSLAKLKSTYADKLPRMVNPHTGRVHTSFSQATAVTGRLASAEPNLQNIPIRTAEG
RRIRAAFIAPPGHRIVSADYSQIELRIMAHLSDDPRLLEAFARGEDVHRATAAEVFGCAP
DEVTAEQRRYAKVINFGLIYGMGAHGLAKNLGIERAAAQGWIDRYFARYPGVAAYMDRIR
SEARERGYVETVFGRRLYLPDIRATQAGRRQAAERAAINAPMQGSAADLIKKAMIATSAW
LKDRQLASRLILQVHDELVLEVPDAELDLVRQALPVLMGSVAQLKVPLVVEVGAGANWDE
AH
NT seq
2709 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgttgttgctcgtcgacggttccagctatctgtaccgtgccttccatgccctg
ccggatctgcgcaccagcgcgggcgaacccaccggcgcgatccgcggtgtcttggccatg
ttgcgccgactcgaatcggaatacgccgccgaataccgcgcctgcgtcttcgacgccaag
ggcaagaccttccgcgatgacctgtatccggcctataaatctcaccgtccgccgatgccc
gaggcgctgcgcgcccagatcgagccgctccatcaggccgtgcaggccgagggctggccg
cttttggtggtcgaaggcgtggaagccgacgatgtcatcggcacgctcacccgccaagcg
gtcgagcgcggctggcaggtggtgatttccaccggcgacaaagatctgactcaactggtg
cgccctggtgtgcgctgggtcaacaccatgagcgaggaggtgctggatgaagcgggcgtg
accgccaaattcggggtgccgcccgagcgcatcgtggattatctggccttggtgggcgat
gcggtcgacaacgtgcccggcgtggacaaatgcggctccaagacggcggtaaagtggctg
accgagtatggctctctggacaacctggtggcccatgccgaagaaatcggcggcaagatc
ggcgaaaacctgcgccgtcatctggactttttgccgctcgggcgccagctcgttaccgtg
gcgaccgatgtcgacctgccggtggagctggaggcgctgcatgcacgagaggacgacaaa
gccgcgctgcgggcgctgtaccagcgttttgagttccgcacctggttgaagggtttggac
gacgaccgaactccggggcaacccttggcggccgaagaaaaccagaacagccgggcgccg
tctccggtttcctacaccaccatcctcgactggcccactttcgatctctggctggccaag
atcgatgcggcggaactgactgccttcgataccgaaactaccagcctggacccgatggcc
gcccgcctggtgggcatgtcgtttgccaccgtggcaggtgaagcggcttacttgccgctg
acccactgcggggccgacgcccctgcccagcttgcgctcgatgaggtactggccaagctc
aaaccctggctggagtccgaggccaagcccaagcttggccagaacatcaaatacgacgcc
catgtgatggccaattacggcatccgtttgcgcggcatcgttcacgacaccctattgcaa
tcctatgtgctggaggccgacaagccacacgacatggatgcactggccaagcgtcatttg
gggctgaccaccgtctcttacgccgaagtgtgcggcaagggggccaagcaaatcggcttc
gatcaggttgcggtggcgcgtgccaccgaatacgccgccgaagatgccgacatcaccttg
cgcctgcatcaccggctgtggccgcaaatcgccgctgaagcgcgtctggctgcgctctac
cgcgagatcgaaatgcccacgcttgccgtgctgctggagatggagcgcaacggggtgttg
atcgataccgcattacttgcccgccatagcgaagcgctgggtcgtcgtctgtacgaactg
caatgccaagcgcaccaactggcgggccagcctttcaatctgggttcgcccaaacaattg
ggcgagattctttttggcaagctcggcttgcccgtggtcaaaaagaccgccaccggccag
ccttccaccgacgaggaggtgctggagaaactggccgaggactacccgttgcccaagctg
ctgctcgaacaccgcagcctggcgaagttgaaaagcacctatgccgacaagctgccgcgc
atggtcaacccgcacaccgggcgggtgcataccagcttttcgcaagcgaccgcggtgacc
ggccggctggccagcgccgagcccaatctgcaaaacatccccatccgcaccgcggaagga
cggcgtatccgcgccgctttcatcgctccgccgggccatcgcatcgtctcggccgattac
tcgcagatcgagttgcgcatcatggcgcatctgtcagacgacccccgtctgctggaagcc
tttgcgcgcggggaagacgtgcaccgtgccaccgccgccgaggtcttcggctgcgcgccg
gatgaggtcaccgccgaacagcgccgttatgccaaggtgatcaactttgggctgatctac
ggtatgggcgcgcatggtctggccaagaacctgggcatcgagcgcgccgccgcgcagggc
tggatcgaccgttactttgcccgctatccgggcgtagccgcttacatggaccgcatccgc
tcggaggcgcgcgagcgcggctacgtcgagaccgtgttcggccgccggctctacctgccc
gacattcgcgccactcaggccggccggcggcaggcggccgagcgtgcggcgatcaatgca
ccgatgcagggtagcgctgccgatctgatcaagaaggcgatgattgccaccagcgcctgg
ttgaaggataggcaactggcttcccggctgattttgcaggtgcacgatgagttggtgctc
gaagtgccggatgccgagctcgatctggttcgccaagcgctgccggtgctgatgggcagc
gtcgctcaactcaaggtgccgctggtggtggaggtgggggccggcgcaaactgggatgag
gcgcattga
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