KEGG   Rhodocyclaceae bacterium Thauera-like: B4966_01830
Entry
B4966_01830       CDS       T05394                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rbh  Rhodocyclaceae bacterium Thauera-like
Pathway
rbh03030  DNA replication
rbh03410  Base excision repair
rbh03420  Nucleotide excision repair
rbh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rbh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B4966_01830
   03410 Base excision repair
    B4966_01830
   03420 Nucleotide excision repair
    B4966_01830
   03440 Homologous recombination
    B4966_01830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbh03032]
    B4966_01830
   03400 DNA repair and recombination proteins [BR:rbh03400]
    B4966_01830
Enzymes [BR:rbh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     B4966_01830
DNA replication proteins [BR:rbh03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B4966_01830
DNA repair and recombination proteins [BR:rbh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     B4966_01830
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B4966_01830
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: AUM01390
UniProt: A0A2K9LGN3
LinkDB
Position
390497..393205
AA seq 902 aa
MPTLLLVDGSSYLYRAFHALPDLRTSAGEPTGAIRGVLAMLRRLESEYAAEYRACVFDAK
GKTFRDDLYPAYKSHRPPMPEALRAQIEPLHQAVQAEGWPLLVVEGVEADDVIGTLTRQA
VERGWQVVISTGDKDLTQLVRPGVRWVNTMSEEVLDEAGVTAKFGVPPERIVDYLALVGD
AVDNVPGVDKCGSKTAVKWLTEYGSLDNLVAHAEEIGGKIGENLRRHLDFLPLGRQLVTV
ATDVDLPVELEALHAREDDKAALRALYQRFEFRTWLKGLDDDRTPGQPLAAEENQNSRAP
SPVSYTTILDWPTFDLWLAKIDAAELTAFDTETTSLDPMAARLVGMSFATVAGEAAYLPL
THCGADAPAQLALDEVLAKLKPWLESEAKPKLGQNIKYDAHVMANYGIRLRGIVHDTLLQ
SYVLEADKPHDMDALAKRHLGLTTVSYAEVCGKGAKQIGFDQVAVARATEYAAEDADITL
RLHHRLWPQIAAEARLAALYREIEMPTLAVLLEMERNGVLIDTALLARHSEALGRRLYEL
QCQAHQLAGQPFNLGSPKQLGEILFGKLGLPVVKKTATGQPSTDEEVLEKLAEDYPLPKL
LLEHRSLAKLKSTYADKLPRMVNPHTGRVHTSFSQATAVTGRLASAEPNLQNIPIRTAEG
RRIRAAFIAPPGHRIVSADYSQIELRIMAHLSDDPRLLEAFARGEDVHRATAAEVFGCAP
DEVTAEQRRYAKVINFGLIYGMGAHGLAKNLGIERAAAQGWIDRYFARYPGVAAYMDRIR
SEARERGYVETVFGRRLYLPDIRATQAGRRQAAERAAINAPMQGSAADLIKKAMIATSAW
LKDRQLASRLILQVHDELVLEVPDAELDLVRQALPVLMGSVAQLKVPLVVEVGAGANWDE
AH
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgcccacgttgttgctcgtcgacggttccagctatctgtaccgtgccttccatgccctg
ccggatctgcgcaccagcgcgggcgaacccaccggcgcgatccgcggtgtcttggccatg
ttgcgccgactcgaatcggaatacgccgccgaataccgcgcctgcgtcttcgacgccaag
ggcaagaccttccgcgatgacctgtatccggcctataaatctcaccgtccgccgatgccc
gaggcgctgcgcgcccagatcgagccgctccatcaggccgtgcaggccgagggctggccg
cttttggtggtcgaaggcgtggaagccgacgatgtcatcggcacgctcacccgccaagcg
gtcgagcgcggctggcaggtggtgatttccaccggcgacaaagatctgactcaactggtg
cgccctggtgtgcgctgggtcaacaccatgagcgaggaggtgctggatgaagcgggcgtg
accgccaaattcggggtgccgcccgagcgcatcgtggattatctggccttggtgggcgat
gcggtcgacaacgtgcccggcgtggacaaatgcggctccaagacggcggtaaagtggctg
accgagtatggctctctggacaacctggtggcccatgccgaagaaatcggcggcaagatc
ggcgaaaacctgcgccgtcatctggactttttgccgctcgggcgccagctcgttaccgtg
gcgaccgatgtcgacctgccggtggagctggaggcgctgcatgcacgagaggacgacaaa
gccgcgctgcgggcgctgtaccagcgttttgagttccgcacctggttgaagggtttggac
gacgaccgaactccggggcaacccttggcggccgaagaaaaccagaacagccgggcgccg
tctccggtttcctacaccaccatcctcgactggcccactttcgatctctggctggccaag
atcgatgcggcggaactgactgccttcgataccgaaactaccagcctggacccgatggcc
gcccgcctggtgggcatgtcgtttgccaccgtggcaggtgaagcggcttacttgccgctg
acccactgcggggccgacgcccctgcccagcttgcgctcgatgaggtactggccaagctc
aaaccctggctggagtccgaggccaagcccaagcttggccagaacatcaaatacgacgcc
catgtgatggccaattacggcatccgtttgcgcggcatcgttcacgacaccctattgcaa
tcctatgtgctggaggccgacaagccacacgacatggatgcactggccaagcgtcatttg
gggctgaccaccgtctcttacgccgaagtgtgcggcaagggggccaagcaaatcggcttc
gatcaggttgcggtggcgcgtgccaccgaatacgccgccgaagatgccgacatcaccttg
cgcctgcatcaccggctgtggccgcaaatcgccgctgaagcgcgtctggctgcgctctac
cgcgagatcgaaatgcccacgcttgccgtgctgctggagatggagcgcaacggggtgttg
atcgataccgcattacttgcccgccatagcgaagcgctgggtcgtcgtctgtacgaactg
caatgccaagcgcaccaactggcgggccagcctttcaatctgggttcgcccaaacaattg
ggcgagattctttttggcaagctcggcttgcccgtggtcaaaaagaccgccaccggccag
ccttccaccgacgaggaggtgctggagaaactggccgaggactacccgttgcccaagctg
ctgctcgaacaccgcagcctggcgaagttgaaaagcacctatgccgacaagctgccgcgc
atggtcaacccgcacaccgggcgggtgcataccagcttttcgcaagcgaccgcggtgacc
ggccggctggccagcgccgagcccaatctgcaaaacatccccatccgcaccgcggaagga
cggcgtatccgcgccgctttcatcgctccgccgggccatcgcatcgtctcggccgattac
tcgcagatcgagttgcgcatcatggcgcatctgtcagacgacccccgtctgctggaagcc
tttgcgcgcggggaagacgtgcaccgtgccaccgccgccgaggtcttcggctgcgcgccg
gatgaggtcaccgccgaacagcgccgttatgccaaggtgatcaactttgggctgatctac
ggtatgggcgcgcatggtctggccaagaacctgggcatcgagcgcgccgccgcgcagggc
tggatcgaccgttactttgcccgctatccgggcgtagccgcttacatggaccgcatccgc
tcggaggcgcgcgagcgcggctacgtcgagaccgtgttcggccgccggctctacctgccc
gacattcgcgccactcaggccggccggcggcaggcggccgagcgtgcggcgatcaatgca
ccgatgcagggtagcgctgccgatctgatcaagaaggcgatgattgccaccagcgcctgg
ttgaaggataggcaactggcttcccggctgattttgcaggtgcacgatgagttggtgctc
gaagtgccggatgccgagctcgatctggttcgccaagcgctgccggtgctgatgggcagc
gtcgctcaactcaaggtgccgctggtggtggaggtgggggccggcgcaaactgggatgag
gcgcattga

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