Rhodocyclaceae bacterium Thauera-like: B4966_03985
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Entry
B4966_03985 CDS
T05394
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh02020
Two-component system
rbh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B4966_03985
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
B4966_03985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbh03021
]
B4966_03985
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rbh02035
]
B4966_03985
Transcription machinery [BR:
rbh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
B4966_03985
Bacterial motility proteins [BR:
rbh02035
]
Flagellar system
Flagellar assembly proteins
Stator
B4966_03985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
AUL99426
LinkDB
All DBs
Position
849571..850341
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AA seq
256 aa
AA seq
DB search
MYDAEGNLDKDHLVEAYAPLVKRIAYHLMAKLPASVDVDDLIQNGMMGLLDAINRYEDGL
GAQFETYAVQRVRGAMLDGLRDSDWLPRSLRRDLRRIEDAVHRLEQQNGRQPTETELAAA
LDLPLTEYQRLLQEARGYQLVHFEDFTDGEGEDYFERHLGVHETNPADLLEDADLRANLI
LAIDDLPEREKLVMALYYDEELNLREIGEVLGVTESRVCQLHSQAIARLRARVLGQHGAA
PAARRGRPPKKPAAGQ
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtacgacgccgaaggcaatctcgacaaagatcacttagtggaggcatacgccccgctg
gtcaagcgtatcgcctatcacctgatggccaagctgccggccagcgtggatgtcgacgat
ctgatccaaaacggcatgatgggcttgctcgacgccatcaaccgttatgaggacggcctg
ggcgcgcagtttgaaacgtacgcggtgcagcgtgtgcgcggcgcgatgctcgatggcttg
cgcgacagcgattggctgccgcgcagcttgcgacgcgatctgcggcgcattgaagatgct
gtgcatagactggagcagcaaaacggccgacagccaaccgagaccgagctggcggccgca
ctcgatttgccgctgaccgaataccagcgcctgttgcaggaagcgcgcggctatcaattg
gtgcatttcgaagacttcaccgatggcgaaggcgaggactatttcgagcgccatctgggc
gtgcatgaaaccaatcccgccgacctgctggaagatgccgatctgcgcgccaatctgatt
ctggccatcgacgatctgccggaacgtgaaaaactggtgatggcattgtactatgacgag
gaactcaacctgagggaaatcggcgaggtgctgggggtaaccgaatcgcgcgtctgccag
ttgcacagtcaggcaatcgcccgcctgcgcgcccgtgtgctggggcagcatggcgcagcg
cccgcggcgcgtcgtgggcgtccgcccaaaaagccggccgccgggcagtga
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