Rhodocyclaceae bacterium Thauera-like: B4966_06150
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Entry
B4966_06150 CDS
T05394
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B4966_06150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbh03019
]
B4966_06150
Enzymes [BR:
rbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
B4966_06150
Messenger RNA biogenesis [BR:
rbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B4966_06150
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
Csc2
Motif
Other DBs
NCBI-ProteinID:
AUL99784
LinkDB
All DBs
Position
complement(1304263..1305612)
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AA seq
449 aa
AA seq
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MIRKLLRKVFRRAAEQPNREPALIPRERHGIAREQISPAARKTCAVLQDAGYKAYVVGGA
VRDLLIGHPPKDFDVATSATPEEVRALFRRSRIIGRRFKIVHVMSGPETIEVSTFRAAQD
AETDEHGRVLRDNVYGTMAEDATRRDFTVNALYYDPTTEQIIDYHHGVADLEQKTLRMIG
DPRTRYREDPVRMLRAVRLAAKLGLAIDPAARKPIREMAALLENVPAARLFDEMLKLLFS
GYAVRCLKQLREEGLHHGLLPLLDVILEQPLGERFVWLSLENTDERVRADKSVSPGFLFA
TLLWHQVLAAWESKKAAGEHAQPALFQAMDEVLEVQADKLAITRRIVGDIKEIWALQPRF
EKRAGKLPYRLIEQPRYRAGWDFLRLRALSGEIGMDLPDWWERFAHAGHEEREALLRAVP
AAGEAAGKKRRRRRRKPSSARAAETAQTT
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgatccgtaaactgctgcgcaaggttttccgccgcgctgctgaacaacccaaccgcgaa
cccgctctgattccgcgcgagcgtcacggcatcgcccgcgagcaaatctcgcctgctgcc
cgcaaaacctgtgcggtgttgcaggatgccggctacaaggcttacgtggtgggcggtgcg
gtgcgcgacctgctgatcggccatccgccaaaggacttcgacgtcgccaccagcgccacg
cccgaagaagtccgcgcgttatttcgccgttcgcgcatcatcggccggcggttcaagatc
gtgcacgtgatgagcggcccggagaccatcgaggtatccacctttcgcgccgcgcaagat
gccgaaaccgacgaacacggccgtgtgttgcgcgacaacgtgtatggcaccatggccgaa
gacgccacccggcgcgactttacagtcaatgcactgtactacgaccccactaccgaacag
atcatcgactaccaccacggtgtggccgacctggaacagaaaaccctgcgcatgatcggc
gatccgcgcacccgctaccgcgaggacccggtgcggatgctgcgcgcagtgcggctggcg
gcaaaactggggcttgccatcgaccctgcggcgcgcaagccgatccgcgagatggccgcg
ctactggaaaacgtgcccgcagcccggctgttcgatgagatgctcaagctgctgttttcc
ggctatgcggtacgttgtctgaaacaactgcgcgaagaaggcttgcaccacggcctgctg
cccttgctcgatgtcatcctggaacagccgttgggcgagcgcttcgtttggctgtcactg
gaaaacaccgatgagcgcgtgcgcgcagacaaatcggtatcgcccggttttctgtttgcc
accctgctctggcaccaggtactggccgcctgggaaagcaaaaaggcagcgggcgagcac
gcccagcccgcgctgttccaagccatggatgaagtgctggaggtgcaggccgacaaactg
gcgatcacccggcgcatcgtcggcgacatcaaggaaatctgggccttgcagccgcgtttc
gaaaagcgcgccggcaagctcccctatcgtctgatcgaacagccgcgctaccgcgccggc
tgggattttctccgtctgcgcgcgctgtcgggagagatcggcatggacttgcccgactgg
tgggaacgttttgcccatgccggtcatgaggaacgcgaagcgctgctgcgggccgtgccg
gccgctggcgaggcggcgggcaaaaagcgccgccgtcggcgccgcaaacctagtagcgcg
cgcgcggccgaaaccgctcaaacaacgtga
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