Rhodocyclaceae bacterium Thauera-like: B4966_06910
Help
Entry
B4966_06910 CDS
T05394
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B4966_06910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbh03019
]
B4966_06910
03009 Ribosome biogenesis [BR:
rbh03009
]
B4966_06910
Enzymes [BR:
rbh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B4966_06910
Messenger RNA biogenesis [BR:
rbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B4966_06910
Ribosome biogenesis [BR:
rbh03009
]
Prokaryotic type
rRNA helicases
B4966_06910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
AUL99914
UniProt:
A0A2K9LAD4
LinkDB
All DBs
Position
complement(1469178..1470986)
Genome browser
AA seq
602 aa
AA seq
DB search
MSAPIESFHDLGLPEALLTALAEIGYETPSPIQAACIPPLLAGRDVLGEAQTGTGKTAAF
ALPALARVTLDLCRPQVLVLTPTRELAIQVAEAFQKYAHHLPGFHVLPLYGGQSMVVQLR
QLQRGAQVIVGTPGRVMDHLERGSLVLDDLRILVLDEADEMLRMGFIDDVEWILTHTPAE
RQTALFSATMPEAIRRVAHRHLRAPQEVKIRAATATVAAIRQCYWQVRGVDKLDALTRIL
EVEDDFDAAIVFVRTKTATVELAERLEARGYAAAALNGDMTQGLREQVIERLKNGALDIV
VATDVAARGIDVPRISHVINYDIPYDTEAYVHRIGRTGRAGRRGSAILFVAPREMRMLKA
IERATGQPIEAIALPSREKIAGRRVAQFRQQIVDTLEHEDLAFFIDVIGRIEKEACFSAR
EIAAALAYLATRERPLQVEETGTGWELATADPLEATQSERRPPGNQKEILARRRAYADGV
LTRYRIEVGRQHGATPREIVGAIANEGGIEGRYIGQIHLFDDYSTVELPKALPPELLDLL
KRIRVRQRALAIRALADGQTAQDRSRARASRSQSASRQADEPGTAAQPRPRTGTAHKRPR
KS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccgatcgaaagcttccacgaccttggcctgcccgaagccttgctgaccgca
ctggccgagatcggctatgaaacaccctcccccatccaggccgcttgcattccgcctctc
cttgcagggcgcgacgtactgggcgaagcgcagaccggcaccggtaaaaccgcagcgttc
gcgctgcccgcgctggcgcgtgtgacactcgatttgtgccggccacaggtactggtgctc
accccaacccgcgaactggccattcaagtcgccgaagccttccagaagtacgctcatcat
ctgcccggctttcatgtactgcctctgtacggcggacaaagcatggtggtgcagttacgc
cagttacagcgcggcgcgcaggtcatcgtcggcacgccggggcgggtcatggatcacctg
gagcgcggcagcctggtgctggacgatctgcgcatcctggttctggatgaagccgacgag
atgctgcgcatgggcttcatcgacgatgtcgaatggatcctgacgcacaccccggccgag
cgccaaaccgcactgttttcggccaccatgcccgaggccatccgccgggtggcgcaccgt
cacctgcgtgcgccgcaggaagtgaagattcgcgccgccaccgccaccgtggcggcaatc
cgccaatgctactggcaggtgcgcggggtagacaaactcgacgcgctgacccgcatcctg
gaagtcgaagatgatttcgacgccgcaatcgttttcgtgcgcaccaaaaccgccaccgtt
gaacttgccgagcgcctcgaggcacgcggctacgcggccgcggcactgaacggcgacatg
acccaggggctgcgcgaacaggtcatcgagcggctaaaaaacggcgcgctcgacatcgtg
gtggccaccgacgtggctgcgcgcggcatcgatgtaccgcgcatcagccatgtgatcaat
tacgacattccgtatgacaccgaagcctatgtgcaccgcatcggccgcacgggccgtgcc
ggccgtcggggttctgcgattctcttcgtcgcgccgcgcgaaatgcgtatgctcaaagcc
atcgaacgcgccactggccagccgatcgaagcgattgcgctacccagccgcgagaagatt
gccggacgccgggtggcgcagttccgccagcagatcgtcgatacgctggagcacgaagat
ctggcctttttcatcgacgtgatcggccgaatcgaaaaagaagcgtgtttttccgcacgc
gagattgccgcggcgttggcttatctggccacccgcgaacgtccgctacaagtggaagaa
accggcacgggctgggaactggccacggccgaccccttggaggctacacaaagcgaacgc
cggccaccgggcaaccagaaagagattctcgcgcggcggcgcgcttacgcggatggtgta
ttgacccgctaccgcatcgaagtcggccgccagcatggggccaccccgagggagatcgtc
ggtgccatcgccaacgaaggcggcatcgaaggccgatacattggtcagatccaccttttc
gatgactacagcacagtcgagctgcccaaggcgctaccaccggaattgctcgacctgctc
aagcgcatccgggtgcgtcagcgtgcgctggcaattcgagcgctcgccgatggtcaaacc
gctcaggatcgcagccgcgcccgcgcatcgcgctcgcaaagcgcgtcgcgccaagcggac
gaacccggcaccgcggcccagcccaggccgcgcaccggcaccgcacacaaacgcccgcgc
aagagctga
DBGET
integrated database retrieval system
