Rhodocyclaceae bacterium Thauera-like: B4966_08980
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Entry
B4966_08980 CDS
T05394
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
B4966_08980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbh03019
]
B4966_08980
03009 Ribosome biogenesis [BR:
rbh03009
]
B4966_08980
Messenger RNA biogenesis [BR:
rbh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
B4966_08980
Ribosome biogenesis [BR:
rbh03009
]
Eukaryotic type
Pre-60S particles
RNases
B4966_08980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Ead_Ea22
Motif
Other DBs
NCBI-ProteinID:
AUM00285
LinkDB
All DBs
Position
complement(1907846..1908394)
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AA seq
182 aa
AA seq
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MAQDQNHLIWLDMEMTGLEPDRDRIIEIAVVITDAQLNVVAEAPVIAVHQPDAVLDAMDE
WNRNTHGKSGLTARVRASTVNETEAEQQMLAFLKEWVPARTSPMCGNSVCQDRRFLARYM
PQLEAWFHYRNLDVSTLKELAKRWRPEVYKGVEKKGKHEALADIHESIAELRHYRDNFLR
LS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcacaggatcaaaaccacctcatctggctggacatggagatgaccgggctggaaccc
gaccgtgaccgtatcatcgaaatcgccgtcgtcatcaccgacgcgcagctcaatgtggtg
gccgaagcgccggtgatcgcggttcatcagcccgatgcggtgctcgatgcgatggacgaa
tggaaccgcaatacgcacggtaaatccgggctgacggcgcgggtgagggcgtccaccgtg
aacgagaccgaggccgagcagcagatgctggcttttctcaaggagtgggtgccggcgcgc
acctcaccgatgtgcggcaattcggtctgtcaggaccgtcgttttctggcgcgttatatg
ccgcaactggaagcctggttccactatcgcaacctggatgtatccacgttgaaggagctc
gccaaacgctggcgaccggaggtctataaaggcgtggagaaaaaaggcaagcatgaggcg
cttgcggatatccacgagtcgattgcggagctacgccactaccgcgacaactttctgcga
ttgtcctga
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