Rhodocyclaceae bacterium Thauera-like: B4966_09305
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Entry
B4966_09305 CDS
T05394
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh03030
DNA replication
rbh03430
Mismatch repair
rbh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B4966_09305
03430 Mismatch repair
B4966_09305
03440 Homologous recombination
B4966_09305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbh03032
]
B4966_09305
03400 DNA repair and recombination proteins [BR:
rbh03400
]
B4966_09305
Enzymes [BR:
rbh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B4966_09305
DNA replication proteins [BR:
rbh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B4966_09305
DNA repair and recombination proteins [BR:
rbh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B4966_09305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DEDDh_C
PAS
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AUM00340
UniProt:
A0A2K9LDQ4
LinkDB
All DBs
Position
complement(1971873..1974062)
Genome browser
AA seq
729 aa
AA seq
DB search
MPARLRFILAVVVLGLLMTGPFLLTAALIWAGTQGAERQALLQVIAPHLPLGTLITAFGF
ALGVMVVRNLFRQYVKGLERLGEQLRLMLSANRNFRVQPSGPPEVCAVASVANELAQQRD
AMMDDVEAQIARAKSRVEEEKNRLAALMSELTQSVVVCNLDGRILLYNHRARAQFQALSE
APAVAGGSELIGLGRSIYHVFERNLIAHALETIRLRLQRQAVQPVANFVTTTRSGQLIRV
QMSPVLGHAPSGDEPAHADEAERVMTGFILMLDNITREFEAESRRDQMVLTLTEGNRASL
ANVRAAAEMLDYPDLQGELRERFRKVIRDEVQAMSARLDEAATQFADALKSRWPLEDMLG
ADLISAAQRRIESVVGLPTKVEDVDETLWIKVDSFSLLQALTYLASRLSDEFQVREVRFR
LSGAGQLVHLDLIWSGQAMSTETVMSWELEPMRLAGENSPLAVRDVIDRHGGEMWLEREK
VRHRAFFRILLPAAMPQQAPAAGQVLRFESRPEYYDFDLFSWSERAHALDDCLLTELAYT
VFDTETTGLNPSEGDEIVQIGAIRVLNGKLLRQESFEQLIDPRRHMPRQAVEITGITPEM
LRGQPTIDQVLPAFHAFAADTVLVAHNAAFDMRFLQLKEGVTGLRFDQPVLDTLLLSAVV
HPNQESHSLDAIAQRFGLTNDGRHTALADAVVTAEVLIKLIPLLAERGIRTLRQAREAAE
KTYYARLKY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgcgtttgcgtttcattctggccgtggtcgtgctcggcttgctgatgaccggg
ccgtttttgctcactgccgcgctgatctgggccggcacccagggcgccgaacgtcaggcg
ctgctacaggtcattgcgccgcatctgccactgggcacgctgatcactgcgtttggcttc
gcactcggtgtgatggtggtgcgcaatctgttccgccagtatgtcaagggcctggaacgt
ctgggcgagcaactgcgcttgatgctcagtgccaaccgcaacttccgtgtccagccctcc
ggtccgccggaagtgtgcgcggtggccagcgtggccaatgagctggcgcagcagcgcgac
gcgatgatggacgacgtcgaagcgcaaatcgcccgcgccaaaagccgggtcgaggaagaa
aaaaaccgcctggcggcgctgatgtccgagctgacccaaagcgtggtggtgtgcaatctg
gatggccgtatcctgctttataaccaccgagcgcgggcgcagtttcaggcattgtcggag
gcgcccgcagtcgctggcggcagtgagctgatcggcctggggcgctcgatctatcacgtc
ttcgagcgtaacctgattgcccatgcgctggaaaccatccgcctgcgcttacagcgccag
gcagtccagccggtggccaatttcgtgaccaccacccgcagcgggcagttgatccgggtg
caaatgtcgccggtactcggtcatgccccgtccggggacgagccggcgcacgcagatgag
gccgagcgggtgatgaccggcttcattctgatgctcgataacatcacccgcgagttcgaa
gccgagtcgcgccgcgaccagatggtgctgactttgaccgagggtaaccgcgcatcgctg
gccaacgtgcgggcggcggccgaaatgctggactatcccgaccttcagggcgagctgcgc
gagcgcttccgcaaggtgatccgcgacgaagtccaggccatgagcgcccgcctggatgag
gcggccactcagtttgccgatgcgctcaagtcgcgctggccgctggaagacatgctgggc
gccgatctgatttccgccgctcagcgtcgcatcgaaagcgtggtaggactgccgaccaag
gtggaggacgtggacgagaccttgtggatcaaggtcgacagcttttcgctgctgcaagcg
ctgacctatcttgccagccgcttgtccgacgagttccaggtgcgcgaggtccgttttcgg
ctaagcggtgcaggccagttggtgcaccttgacctgatctggtccggtcaggcgatgagc
accgaaacagtcatgagctgggaactggaaccgatgcgtttggccggtgaaaacagcccg
ctggcggtacgcgacgtcatcgatcgccatggcggcgaaatgtggttggaacgtgaaaaa
gtgcgccaccgcgctttctttcgcatcttgctgccggctgcgatgccgcaacaggcgcct
gcggcgggccaggtgctgcgttttgagagccgtcccgaatactacgatttcgatctattc
tcctggtcggaacgggcccatgcgctggacgactgtttgctcaccgagctggcctatacg
gtgttcgataccgaaaccaccggtctcaacccctccgaaggcgacgagatcgtgcaaatt
ggtgccatccgggtactcaacggcaagctgttgcggcaggaatccttcgaacaactgatc
gatccgcgtcgccacatgccgcgccaggcggtggaaatcaccggcattaccccggagatg
ttgcgtggccaaccgacgatcgatcaagtgctgccggcttttcatgcctttgcggccgat
accgtgctggtggcacacaatgcggcgttcgatatgcgctttttgcaactgaaagaaggc
gtcaccggcctgcgtttcgaccagccggtgctcgacaccttgcttttgtccgcagtggtg
catcccaaccaggaatcgcacagtctggacgccattgcccagcgcttcggactgaccaat
gacggccgccacaccgcgctggccgatgcggtggtcaccgcagaggtgttgatcaagctc
attcccttgctcgccgaacgtggcatccgcaccttgcgccaggctcgcgaagcggctgaa
aagacctattacgcgaggctgaaatactga
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