Rhodocyclaceae bacterium Thauera-like: B4966_11810
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Entry
B4966_11810 CDS
T05394
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rbh03016
]
B4966_11810
Enzymes [BR:
rbh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
B4966_11810
Transfer RNA biogenesis [BR:
rbh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
B4966_11810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AUM00778
UniProt:
A0A2K9LCU0
LinkDB
All DBs
Position
complement(2455956..2457308)
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AA seq
450 aa
AA seq
DB search
MKKLYIRTFGCQMNEYDSEKMADVLGVAEGLEKTDNPEEADVILFNTCSVREKAQEKVFH
DLGRVKHLKQAKPELIIGVGGCVASQEGEAIVARAPFVDVVFGPQTLHRLPKLIDARRAT
GRPQVDISFPEIEKFDALPPARVEGASAFVSIMEGCSKYCTFCVVPYTRGEEVSRPLDDI
LAEVAGLAAQGVKEVTLLGQNVNAWRGALSRDSGEDTGDFAFLLECVAEIPGIERLRYTT
SHPREMTPRLFEAYEKIPKLVSHLHLPVQSGSDRVLAAMKRGYTVLEYKSVVRKLRAVRP
DLSLSSDFIVGFPGETEEDFQKTLKLVEELNFDTSFSFVYSARPGTPAADLEDPVPQQTK
LRWLAQLQKQLETQALAISQAMVGSVQRILVEGPSKKNADELYGRTENNRVVNFPAPSPN
RDRLIGQFIEVTITAALPHSLRGEICLRES
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagctttacatccgcaccttcggctgtcagatgaacgagtacgattccgagaag
atggccgacgtacttggggtggccgaagggctggagaaaaccgacaacccggaagaagcg
gatgtgatcctcttcaatacctgctcggtgcgtgagaaggcgcaggaaaaggtgtttcac
gatctggggcgggtcaagcatctcaagcaggcaaagcccgagctgatcattggcgttggg
ggatgcgtggccagtcaggaaggtgaggccatcgtggcgcgggcaccttttgtggacgtg
gtgtttggcccgcagaccttacaccgtctgcccaagctgatcgacgcgcggcgtgctacc
gggcgtccgcaggtggatatttcctttccggaaatcgaaaagttcgatgccctgccgccg
gcgcgggtggaaggggccagcgcttttgtgtccattatggagggttgctccaagtactgc
accttttgcgtggtgccttatacccgcggtgaggaggtctcgcgcccgctcgatgacatt
cttgccgaagtggccggtttggcggcgcaaggcgtcaaggaggtgaccttgctggggcaa
aacgtcaatgcttggcgtggtgctttgtctcgggacagcggcgaggataccggtgacttt
gcttttttgctcgaatgtgtggccgaaattccaggcatcgagcgcttgcgttacaccacg
tcgcacccgcgcgagatgacgccgcggctgttcgaagcctacgagaaaattcccaaactg
gtttctcatctgcatttgccggtacagtccggctcggatcgggtgctggcggcgatgaag
cgcggctacacggtgctcgaatacaagtcggtggtgcgcaagctgcgtgcggtgcgcccc
gatctgtcgctgtcgtcggatttcatcgtcggcttccccggcgagaccgaggaagacttc
caaaaaaccctcaagctggtcgaggagctgaacttcgatacctcgttcagtttcgtctat
agcgcgcgtccgggcactccggctgccgacctggaagacccggtgccgcagcagaccaag
ttgcgctggttggcgcaattgcaaaaacagttggagactcaggcgctggcaatcagccaa
gcgatggttggcagcgtacagcgcatcctggtcgaagggccgtcgaagaagaacgcggat
gagctatacggccgcaccgaaaacaaccgcgtggtcaatttccccgcgccgtcgcccaat
cgtgaccgcctgatcggccagttcatcgaggtcaccatcaccgctgcgctgccccacagc
ctgcgtggtgagatttgcctgcgggaatcctga
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