Rhodocyclaceae bacterium Thauera-like: B4966_13530
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Entry
B4966_13530 CDS
T05394
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
rbh
Rhodocyclaceae bacterium Thauera-like
Pathway
rbh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rbh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
B4966_13530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rbh02022
]
B4966_13530
02035 Bacterial motility proteins [BR:
rbh02035
]
B4966_13530
Two-component system [BR:
rbh02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
B4966_13530
Bacterial motility proteins [BR:
rbh02035
]
Pilus system
Twitching motility proteins
B4966_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_16
AAA_5
HTH_23
HTH_20
HTH_28
VpsR
HTH_30
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AUM01058
LinkDB
All DBs
Position
complement(2820545..2821924)
Genome browser
AA seq
459 aa
AA seq
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MINEDRRAPPRAADVLVVDDEDDIRELIALSLLRMGLACDTAGSVGEARALLAARRYRLC
LTDMRLPDGDGLELVEYIQSHQPGLQVAVITAFGSIDTAIRALKLGAFDFVTKPVELKRL
RELVTHALRSPGENTLDAGGRQLIGRSAALEQLRGQIVKLARNQAPVFIHGESGTGKEVI
ARLIHSLGPRAAGPFVPVNCGAISPELMESEFFGHKKGSFTGAACDKQGLFQAASGGTLF
LDEVAELPLAMQVKLLRAIQERAVRPVGAHGEEPVDVRILSASHRDLAKLVADNRFRQDL
YFRINVITLRVPALRERPEDIPDLAAHVLARLAERDGTAPRRLSPAALAALQQHAFPGNV
RELENLLERACALCEGNEIGPQDIDLYPTEGLLRAMQRPDTGEFEAPAEPHAPDEDSDEE
RIRVLRMLDETRWNRSAAARRLGMTLRQLRYRLQKWGME
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgattaacgaagaccgcagggcccccccgcgcgccgccgatgtgttggtggtcgatgac
gaagacgacatccgcgaactgatcgcactgtcattgctgcgcatgggcttggcctgcgac
actgccggctcggtgggcgaggcacgcgcgctgttggcggcgcgccgctaccgcctgtgc
ctgaccgacatgcgtctgcccgatggcgacggtctggaactggtcgagtacattcaaagt
caccaacccggcctgcaggtggcggtgattaccgcctttggcagcatcgacaccgccatt
cgcgcgctcaaactgggtgccttcgacttcgttaccaaaccggtggaactcaagcggctg
cgcgagctggtcacccatgccttgcgcagccctggcgaaaatacgctggacgccggcggg
cgccagctcattggccggtcggccgcgctcgagcaactgcgtgggcaaatcgtcaagctg
gcgcgcaaccaggcgccggtcttcattcacggcgaatcgggcaccggcaaggaggtcatc
gcccgcctgattcactcgctcggcccgcgcgcggccggccccttcgtgccggtcaattgc
ggcgccatctcgcccgagctgatggaaagcgagttcttcggccacaaaaagggcagcttc
accggcgccgcctgcgacaagcagggcctctttcaggccgccagcggcggcacgctgttc
ctcgacgaagtggccgaactgccgcttgccatgcaggtgaagctcttgcgcgccattcag
gagcgcgccgtgcgcccagtgggtgcgcacggcgaagaaccggtggatgtacgcattctg
tccgcctcgcaccgcgacctggccaaattggtggccgacaaccgctttcgccaagacctt
tactttcgtatcaacgtcatcaccctgcgggtgccggccttacgcgagcgcccggaagac
attcccgatctggccgcccatgtgctggcccgcctggccgagcgcgatggcactgccccg
cgccgcctgtcgcctgccgcgctggcggccctgcagcagcacgccttcccgggcaatgtg
cgcgagctggaaaacctgctggagcgtgcctgcgccctgtgtgagggcaacgaaatcggc
ccgcaggacatcgatctataccccaccgaaggcttgctgcgcgccatgcagcgcccggac
accggtgaattcgaagcgcctgccgagccgcacgcgccggacgaagatagcgatgaagaa
cgcatccgggtgctgcgcatgctggatgaaacccgttggaaccgctccgcggctgcgcgc
cggttggggatgaccctgcggcagctacgctaccggttgcagaagtgggggatggagtaa
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