Robiginitalea biformata: RB2501_01875
Help
Entry
RB2501_01875 CDS
T00992
Name
(GenBank) putative DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi03030
DNA replication
rbi03430
Mismatch repair
rbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RB2501_01875
03430 Mismatch repair
RB2501_01875
03440 Homologous recombination
RB2501_01875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbi03032
]
RB2501_01875
03400 DNA repair and recombination proteins [BR:
rbi03400
]
RB2501_01875
Enzymes [BR:
rbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RB2501_01875
DNA replication proteins [BR:
rbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RB2501_01875
DNA repair and recombination proteins [BR:
rbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RB2501_01875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Peptidase_M9
Motif
Other DBs
NCBI-ProteinID:
EAR14135
UniProt:
A4CQ50
LinkDB
All DBs
Position
complement(3218525..3219301)
Genome browser
AA seq
258 aa
AA seq
DB search
MKLNLSKPICFFDLETTGTNIATDRIVELAILKVFPNGNKESKTWLVNPGVPIPEEASAI
HGITDEKVAGEPTFRELAREVYQMIQGCDLAGFNSNRFDIPLLAEELLRAGVDFDMKNAV
SVDVQTIFHKMEKRTLAAAYQFYCGKELTDAHSATADTQATYEVLLSQLDRYSELTNNVQ
ELAAFSTHNDTVDFAGFIRRDENGEEVFGFGKHKGRSVHEVLEQEPGYFGWMLNADFPLY
TKKVLTQIKLSKLNNKLG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaacctgagtaagcccatttgtttttttgacctggagaccacggggaccaat
atcgctaccgaccggattgtggagctcgccatcctgaaggtattccccaacgggaacaag
gaaagcaaaacctggctggtcaaccccggggtgcccatccccgaggaggcgtccgccatc
cacggcatcacggacgaaaaggtggctggcgagcccaccttccgcgaactggcccgggag
gtttaccagatgatccaggggtgtgacctggcgggtttcaattccaaccgcttcgatatc
cccctcctggcggaagagcttctgcgggccggggtggactttgatatgaaaaatgccgtt
tccgtggacgtgcagactattttccacaaaatggagaagcggaccctggctgctgcctac
cagttttattgcggcaaggagctgaccgatgcccacagcgccacagcggatacccaggct
acttacgaagtattgctctcccaactggaccgttactcggaactgaccaacaacgtgcag
gagctggcggcgttttccacccacaacgacaccgtggattttgccgggttcatccgtcgg
gatgaaaacggggaggaggttttcgggttcgggaagcacaagggcaggagcgtccacgag
gtattggagcaggaacccgggtatttcgggtggatgctcaatgccgacttcccgctgtac
accaagaaagtactcacccagatcaagctcagcaagctcaacaacaaactcggataa
DBGET
integrated database retrieval system
