Robiginitalea biformata: RB2501_02260
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Entry
RB2501_02260 CDS
T00992
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rbi
Robiginitalea biformata
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rbi03009
]
RB2501_02260
Enzymes [BR:
rbi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
RB2501_02260
Ribosome biogenesis [BR:
rbi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RB2501_02260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
EAR14210
UniProt:
A4CP89
LinkDB
All DBs
Position
complement(3309908..3310939)
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AA seq
343 aa
AA seq
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MAAHSQQEDPEEDELFEHYSFTADTGQKPLRVDKFLMTRIRNATRNKIQQAARDGNIRAN
EQVIKQNYRVKPGDTIRVLFEHPPYENLLLPEDIPLDIVYEDEVLLVVNKPAGMVVHPGH
GNYTGTLVNALVHHLDQLPLNSDNRPGLVHRIDKETSGLLVIAKTEAAMANLARQFFDKT
TRREYLALVWGNVADDSGTVEGPIGRNPKNRLQMQVFPDGSQGKEAVTHYRVEERLGYVT
LVSCRLETGRTHQIRVHMQHIGHTIFNDSRYGGDRILKGTSFTKYKQFVENAFKILPRQA
LHARTLGFTHPLSGKELDFEAPVPEDMAACIIKWRDYAKHRLE
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcactcccaacaggaagacccggaagaagacgaattatttgagcattacagc
tttaccgcggatacgggccagaaacccctccgggtagacaaattcctgatgacccgcatc
cggaacgccacccgcaacaagatccagcaggcggcccgggacggcaatatccgggccaac
gaacaggtgatcaaacaaaattaccgcgtcaaacccggggatacgatccgcgtgttgttc
gaacacccgccttacgagaacctcttgttgcccgaggacatcccgctggatattgtctat
gaggacgaggtgctgctggtggtaaacaagccagccgggatggtggtccacccgggccac
ggaaattataccggtaccctggtcaatgccctggtccaccacctggaccagcttccgtta
aattcggataatcgcccgggcctcgtccaccgcatcgacaaggagacctccggcctgctg
gtcattgccaagacggaagccgccatggccaacctggcccggcaatttttcgacaagacc
acccggagggagtacctggccctggtctgggggaatgttgccgacgattcgggcaccgtg
gaggggcctatcggcaggaacccgaaaaaccggctgcagatgcaggtgttcccggacggc
tcccagggcaaggaggccgtgacgcattaccgggttgaggaacgcctggggtatgtcacc
ctggtttcctgcaggctggaaaccggacggacccaccagatccgcgtccatatgcagcac
attggccatacaatcttcaacgactcccgctatgggggcgaccgcatcctcaaggggact
tcttttaccaagtacaaacagtttgtggagaacgccttcaagatcctgccccgtcaggcc
ctacatgccaggacccttggctttacccacccgctgagcgggaaggagctggattttgag
gccccggtgcctgaagatatggcggcctgtattatcaaatggcgggactacgcaaagcac
cgcctggaatag
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