Robiginitalea biformata: RB2501_02270
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Entry
RB2501_02270 CDS
T00992
Name
(GenBank) D-alanylalanine synthetase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00470
D-Amino acid metabolism
rbi00550
Peptidoglycan biosynthesis
rbi01100
Metabolic pathways
rbi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RB2501_02270
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RB2501_02270
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RB2501_02270
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbi01011
]
RB2501_02270
Enzymes [BR:
rbi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RB2501_02270
Peptidoglycan biosynthesis and degradation proteins [BR:
rbi01011
]
Precursor biosynthesis
Amino acid ligase
RB2501_02270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
GARS_A
DUF5938
ATPgrasp_ST
PRODH
Motif
Other DBs
NCBI-ProteinID:
EAR14212
UniProt:
A4CP91
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All DBs
Position
3311622..3312611
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AA seq
329 aa
AA seq
DB search
MGSTKKIAVIMGGYSSEYEISLKSGEVVCKWLDRDQYDPYRILIRRDKWVMLGDSGREYP
VSRHDFSVELEDGTLRFDCVFNAIHGTPGENGLMQAYFELIGMPQTSCGFYQAAVTFNKR
DLLGILKSAGVPAARSYHLDRGQELNQQAILDAVGLPCFVKANRAGSSFGVSLVREASGL
QAAVENALKEDDEILIEAALQGTEVSVGVIRYQGATRVLPITEIVSENDFFDYQAKYEGK
SREITPARIPEDTAEKVRELAARIYDRLRMTGYSRSEFILVDGEPHLLEVNTTPGLTEAS
ILPQQAACAGISLTELFGSAIADALDKNG
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggatccaccaaaaaaattgccgtgatcatgggcggctattccagcgaatacgaaatt
tccctgaaaagcggggaggttgtctgcaagtggctggaccgcgatcaatacgacccgtac
cgcatcctgatccgccgcgataaatgggtgatgctgggggattccggccgggaatacccc
gtcagccggcacgacttcagcgtcgaactggaggacggcacactccggttcgactgcgtc
ttcaatgccatacacggtaccccgggggaaaacggtctgatgcaggcctattttgaattg
atcggcatgccccagacttcctgcggtttttaccaggcggcggttacctttaataaacgc
gacctgctgggtatcctgaaatccgccggggtgccggctgcccggtcctaccacctggac
aggggccaggagctcaaccagcaggccatcctggatgcggtgggcctgccgtgttttgta
aaggccaaccgggcgggcagcagtttcggggtgagcctggttcgggaagcctccggcctg
caggccgctgttgaaaacgccctgaaggaagacgacgaaatcctgatcgaagcagccctc
cagggcaccgaggtctccgtgggggtgatccgctaccagggggccacccgcgtactgccc
atcaccgaaatcgtttcggaaaacgatttcttcgactaccaggccaaatacgaaggcaag
tcgcgggaaattaccccggcccggatcccggaagacactgcagaaaaagttcgggagctc
gcggcgcggatctacgaccggctccggatgaccgggtacagccgctcggagtttatcctg
gtggatggggagccccacttgctcgaagtaaacaccacccccgggcttaccgaggcgagc
atcctgccccagcaggccgcctgtgccggcatctcgcttaccgaactgttcgggagcgcc
attgcggacgctttggacaaaaatggttag
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