Robiginitalea biformata: RB2501_03660
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Entry
RB2501_03660 CDS
T00992
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RB2501_03660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbi03400
]
RB2501_03660
Enzymes [BR:
rbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RB2501_03660
DNA repair and recombination proteins [BR:
rbi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RB2501_03660
RecFOR pathway proteins
RB2501_03660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_22
AAA_5
AAA_3
Mg_chelatase
AAA_16
TsaE
nSTAND3
TIP49
AAA_14
Rad17
AAA_33
NB-ARC
AAA_18
RNA_helicase
AAA_24
NACHT
AAA_28
NPHP3_N
NTPase_1
ABC_tran
Bac_DnaA
AAA_17
AAA_PrkA
AAA_11
DUF815
Motif
Other DBs
NCBI-ProteinID:
EAR15960
UniProt:
A4CGA2
LinkDB
All DBs
Position
complement(85635..86657)
Genome browser
AA seq
340 aa
AA seq
DB search
MNEHLDPTADGLSPEELDIERALRPVSFDDFTGQAQVLENLTVFVQAANLRQEALDHTLL
HGPPGLGKTTLAHILANELGVGLKVTSGPVLDKPGDLAGLLTNLEPRDVLFIDEIHRLSP
VVEEYLYSAMEDFKIDIMIETGPNARSVQLHLNPFTLVGATTRSGLLTAPMRARFGISSR
LEYYNTELLATIVQRSAEILKVPITEDAAIEIAGRSRGTPRICNALLRRVRDFAQIKGNG
NIDMEISRFGLKALHVDAYGLDEMDNKILATIIDKFKGGPVGLTTLATAVSENAETIEEV
YEPFLIQQGFIMRTPRGREVTELAYQHLGRIKGGGQPGLF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaacatctggaccctacggcagacggactatcccctgaggagctcgacattgag
cgcgcactcaggccggtttcctttgacgattttacgggccaggcccaggtcctggaaaac
ctcacggtctttgttcaggcggccaacctcaggcaggaagccctggaccacacgctcctg
cacggcccgcccgggctggggaagaccaccctggcgcatatcctggccaacgaactcggg
gtggggctgaaggttacctccgggcctgttttggacaagccgggcgacctggcagggttg
cttaccaacctggaacccagggatgtcctgttcatcgacgagatccaccggctcagcccg
gtggtggaggaatacctctattcggccatggaagatttcaagatcgatatcatgatcgag
accgggccgaatgcccgatcggtacaattacacctgaacccctttacgctggttggcgcc
accacgcgttcgggcctgcttacggcccccatgagggcgcgctttggcatttccagccgg
ttggaatactacaacacggagctcctggccaccattgtgcagcgctctgcggaaatactg
aaagtccccatcacggaggacgccgccatcgagattgccggccgcagccggggtaccccc
cggatctgcaatgcgctgcttcgccgcgtccgggattttgcccagatcaaggggaacggg
aacatcgatatggagatctcccgttttggcctgaaggcgctccacgtggatgcctacggc
ctggacgagatggacaacaagatcctcgcaaccatcatcgacaagttcaagggagggcca
gtagggcttaccaccctggccacggcggtctccgaaaacgccgaaaccatcgaggaggtg
tacgaacccttcctgatacagcagggttttatcatgcgcaccccccgcggccgggaggtc
accgaactcgcctatcaacacctgggccgcatcaaaggcggggggcaacccggacttttt
tag
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