Robiginitalea biformata: RB2501_05560
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Entry
RB2501_05560 CDS
T00992
Name
(GenBank) putative TonB-dependent outer membrane receptor protein
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
rbi
Robiginitalea biformata
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbi02000
]
RB2501_05560
Transporters [BR:
rbi02000
]
Other transporters
Pores ion channels [TC:
1
]
RB2501_05560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
CarbopepD_reg_2
CarboxypepD_reg
EMC7_beta-sandw
PEGA
Motif
Other DBs
NCBI-ProteinID:
EAR16340
UniProt:
A4CHD2
LinkDB
All DBs
Position
497895..500171
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AA seq
758 aa
AA seq
DB search
MNIRCILPIISLLLGLAPALAQDRELRGMVTDSEGPVPLANVYLRNLETGTATDVDGQFR
LEGLPDGTHTLVVSAVGYRTHRQSVRVGPAGSRLEIRLQPRAEQLNVTVVTGTLKAVRRF
ESPVPVEVYSPAFIRKNPTANVFEALQAVNGVRPQINCNVCNTGDIHINGLEGPYTLVLI
DGMPIVSGLGTVYGLSGIPNALIEQIEIVKGPASSLYGSEAVGGLINIITKNALTAPEFF
ADGFATGWGEYNLDAGGSLRIGENTRVLTGINYFNYDVPTDNNGDNFTDVTLQDRISVFQ
KWNFTRDSSREFSLAGRFFYEDRWGGEMQWTPEFRGTDSIYGESIYTRRWELLGRYQLPL
PEKLLLSVSYNDHRQDSWYGDLPYLADQRIGFGQLSWDKTAGNHDLLIGAALRYNYYDDN
TPATDSPRGNDPDRVWIPSLFAQDEYRFSGKHTLLAGLRYDQDPRHGSIWTPRGAVKLQL
GEHELLRLNFGTGFRVVNLFTEDHAALTGARDVVIAEDLLPEQSWNLNLNYLRKFYTPDG
HFFSVDASAFYTDFSNQILPDYDSDPNRIFYRNLDGRSVSRGFSLNLDAAFANGLRVAAG
TTLQDVRVDAEGTNSRPVLTERYSATWSVSFPIRPLQLTADYTGNLYGPMRLPLAGDLDP
RPEYSPAWSIQNIQFTFKGLEHMEIYAGVKNLLNWTPNRGTPFLIARAGDPFDKQVQFDA
SGDPVPSEGNPYGLTFDPAYVYGPNQGIRGFAGLRYQL
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaatatccgctgtatcctcccgattatcagcctgctccttggcctggcacccgccctg
gcccaggatcgggaattgaggggaatggtaacggattccgaaggccccgttcccctggcg
aatgtctacctgcggaatctggaaacgggaactgccacggatgtggacgggcagttccgc
ctggagggcctccccgatggcacgcataccctggtggtatccgccgtaggatatcggacc
caccgccaatcggtccgcgtggggccggcaggctcccgcctcgagattcggttgcagccc
cgggcggaacaattgaacgtgacagtggttaccgggaccctcaaggcagtccgccgtttt
gagagcccggtacctgttgaagtctattcccccgcttttatccggaagaacccaactgcc
aacgtttttgaggcacttcaggccgtaaacggggtgcgcccgcagatcaattgcaacgtg
tgcaacaccggcgatatccacataaacggccttgaggggccgtataccctggtactgata
gacggcatgccgattgtcagcggcctgggaaccgtatacgggttgtcgggtatcccgaat
gcgctgatcgaacagatcgagattgtcaaagggccagcctcttcgctatacggcagcgag
gcggtgggcggtctgattaacatcatcacaaaaaatgcgctgacggccccggaattcttt
gccgacggctttgccacgggctggggcgaatacaacctggatgccgggggttccctgcgg
atcggggagaacacccgggtgctcaccggtataaactactttaactacgatgtgccgaca
gacaacaacggggacaactttacagacgtcacgttgcaggatcggatctccgtcttccag
aaatggaatttcacccgggattcttcccgggaattctcgttggcagggcgatttttttac
gaagaccgctgggggggcgaaatgcagtggaccccggaattccggggaaccgattccatt
tacggggagagcatctacacgcgacgctgggaacttctcggccggtaccagttgcccctg
cccgaaaaactcctcctgtccgtatcctataacgaccaccgccaggattcctggtacggc
gacctcccctacctggccgaccagcggatcggctttgggcagctgagctgggacaagaca
gccgggaaccacgacctgctgataggggctgcactgaggtacaactactacgacgacaat
accccggctacggattcccctcggggcaatgacccggaccgggtctggatcccgagcctc
tttgcccaggacgaataccggttctccggcaaacacacgctgctggccggcctgcgatac
gaccaggatccccggcacgggagtatctggaccccccggggggccgtaaagctccagctc
ggggaacacgaactcctccggctgaacttcgggaccggcttccgggtagtcaacctgttc
accgaagaccacgcggcccttaccggcgcccgggacgtggtgattgccgaggacctgctc
ccggaacaatcctggaacctcaacctgaattacctcaggaaattctacacgcccgacggg
cacttttttagtgtggacgcctcggctttctacacggatttctcgaaccagatcctgccc
gattacgattcggaccccaaccggatcttctaccggaacctggatggccggtccgtttcc
cgggggttcagcctcaacctggatgcggccttcgccaatggcctgcgggtggctgccggg
accacgttgcaggacgtccgcgtcgacgctgaagggaccaacagccgacctgtgctcacc
gagcgctattcggccacctggagcgtctccttccccatccgcccgctgcagctgacggct
gattatacgggcaacctctatggccccatgcgcctgcccctggcaggggacctggacccg
cgtccggaatattcccctgcctggagcatccagaacatccagttcaccttcaaggggctc
gagcatatggaaatctatgcgggggtcaagaacctgctgaactggacgccgaaccggggt
acgcccttcctgattgcccgggccggggacccctttgacaaacaggtgcaattcgacgcg
tccggggacccggtaccctcggaaggcaacccctatggcctcacttttgaccccgcctat
gtctatgggcccaaccaggggatccgcggatttgccgggttgcgttaccagctctga
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