Robiginitalea biformata: RB2501_05930
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Entry
RB2501_05930 CDS
T00992
Name
(GenBank) selenocysteine lyase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00450
Selenocompound metabolism
rbi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RB2501_05930
Enzymes [BR:
rbi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
RB2501_05930
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
RB2501_05930
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GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
EAR16414
UniProt:
A4CHK6
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All DBs
Position
578357..579571
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AA seq
404 aa
AA seq
DB search
MFDVARIRNDFPILSRQVNGEPLVYLDNAATSQTPRQVIDAITDYYSRYNANIHRGVHTL
SQEATDAYEQARIKIQKHFNAAHPHEIIMTSGTTHGINLVAQGFTGFLQQGDEVWVSAME
HHSNIVPWQMLCERTGARLRVIPMNKNGELELDTFREGLSDKTRLVFVNHVSNALGTVNP
IEEIISLAHDAGAAVLVDGAQAAPHIRADLQALDADFYTVSAHKLCGPTGVGALYGKESW
LEKLPPYQGGGEMIEEVTFEKTTYAGLPHKFEAGTPNICGGIAFGAALDYLNGIGMKAIA
EYEAELLAYATKNLKTIPGLKIYGEAARKTSVISFNLEGIHPYDVGTILDKLGIAVRTGH
HCAQPVMDFYGIPGTVRASFSFYNTREEADRLVAAVEKARQMLA
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgttgcccgcatccgtaacgatttccccatcctgtcgcggcaggtgaacggg
gagccgctcgtctacctggacaacgcggccacctcccagacgccccggcaggtaatcgac
gccattacggattactattcccgctacaacgcaaatatccaccggggggtgcatacgctg
tcccaggaagccaccgatgcctatgagcaggcgcggatcaaaatccagaagcactttaac
gcggcccatccccatgagatcatcatgacctccgggacgacccacggcatcaacctggtg
gcccaggggtttaccgggtttttacagcaaggcgacgaggtttgggtgtccgccatggaa
caccactccaacatcgtcccgtggcagatgctctgcgagcggaccggggccaggcttcgg
gtgatcccgatgaacaaaaatggcgaactggagctggacaccttccgggagggcctctcg
gacaagacgcgcctggtttttgtgaaccacgtatccaatgcgctcgggaccgtcaacccg
attgaagaaattatttccctggcgcatgacgccggggctgccgtactcgtggacggtgcc
caggccgccccccatatccgggcagacctgcaagccctcgacgcggacttctacacggtt
tccgcccacaaactctgcggccccaccggggtaggcgccctctacggcaaggaatcctgg
ctggagaaactgcccccctaccagggcgggggcgagatgatcgaagaggtcacttttgag
aaaaccacctatgccgggctgccccataaattcgaggcaggcacgccaaatatctgcggg
ggcatcgccttcggcgccgccctggactacctgaacggaatcgggatgaaagccatagcg
gaatacgaagcggaattactggcctacgccacgaaaaatctgaaaacgattccgggcctg
aaaatctacggggaggccgcccgaaaaacctcggtgatttccttcaacctggaaggcatc
cacccctacgacgtggggaccatcctggacaaattgggcattgccgtgcggaccggacac
cattgcgcccagcccgtgatggacttttacggcatcccgggaaccgtccgggcgagtttt
agcttttacaatacccgggaggaagcagaccggctggtagccgcagtggaaaaggcccgg
cagatgctcgcctag
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