Robiginitalea biformata: RB2501_07215
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Entry
RB2501_07215 CDS
T00992
Name
(GenBank) extracellular solute-binding protein, family 3
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
rbi
Robiginitalea biformata
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbi01011
]
RB2501_07215
Enzymes [BR:
rbi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
RB2501_07215
Peptidoglycan biosynthesis and degradation proteins [BR:
rbi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
RB2501_07215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SBP_bac_3
SLT_2
Phosphonate-bd
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
EAR16671
UniProt:
A4CIB3
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All DBs
Position
complement(857412..858872)
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AA seq
486 aa
AA seq
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MRLRSLPYIALLLLLCNCSSRPGEPGSRAGDPPKPARTVDAIRESGKLRALIAYSATSYF
LYRGQPMGYEYELTRRLAADLGVELDLRIARNLDEMLEILQRGEVDLVAHGLAITRERKK
KVAFADYLYLTRQVLVQRKPAGWRRLTRDQIRDRLVLDPVELIGDTVSLRKNSSYLERVN
NLSQEIGGIIHVDTLDGNLATDEIIQMVVDKKIKYTFADQNLARINASHHPILDVSVPVS
FSQRIAWAVSRDSPGLLKAINQWLEREKKETDYYVIFNKYFKNRRNFSRRVNSPFYSLNE
GKISPYDTLIKQEAREMGWDWRLLASVVYQESRFNATAQSWTGASGLMQLMPATAEELGV
ADRTNPRENLEAGARYLEALYQRFPTVTDSLQRIKFTLASYNCGYQHVEDARKLADVRGY
DKDCWDENVDRMLLALSTPDNYLNEVVDYGYVRGEEPYRYVKQVFERFEHYRSVLQDIGP
DMASVP
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgttccctcccgtatattgccctgttgttgttgctctgcaactgctcctcc
cgacccggcgagcccggtagccgggcaggggacccccccaaacccgcccggaccgtggat
gccatacgcgaaagcgggaaattgcgggccctgatcgcctatagcgccacgagttatttc
ctgtaccgcgggcagcccatggggtatgaatacgaattgacccgacggcttgcagcagac
ctgggggtagaattggacctccggattgcccgcaacctggacgaaatgctggaaatcctc
cagcggggggaagtggacctggtggcccacggactggccatcacccgggaacggaaaaaa
aaggtcgcttttgccgattacctctacctgacccggcaggtcctggtacagcgaaaaccc
gccgggtggcggcggctcacccgcgaccagatccgggaccgcctcgtcctggacccggtg
gaactcatcggggatacggttagcctccgcaagaattcctcctacctggaacgcgtcaac
aacctctcccaggagatcgggggcattatccatgtagacaccctggacggcaacctggcc
acggacgaaattatccagatggtggtggataaaaagatcaaatacacctttgcggaccag
aacctggcccggatcaacgcctcccatcaccccatcctggacgtgagcgtcccggtgagc
ttctcccagcgaattgcctgggcggtttccagggattcccccgggttgctcaaagccatc
aaccaatggcttgaacgggagaaaaaagagaccgattactatgtcatttttaataaatac
ttcaagaaccggcgcaatttcagccggcgcgtaaacagtcccttctacagcctgaatgag
gggaagatcagcccgtacgacacgctgatcaaacaggaagcgcgggaaatgggctgggac
tggcgcctgctggcctccgtggtctaccaggagtcccgtttcaatgccacggcccaatcc
tggaccggggcctcgggcctgatgcaactgatgcccgccacggccgaggaactcggggtg
gccgaccggaccaatccccgggagaatctggaagccggggcccggtacctggaagcactg
taccagcgcttccccacggtcacggattccctgcagcgcatcaagttcacgctggcctca
tacaattgcggctaccaacacgtagaagatgcgcgcaaactggcagacgtcagggggtat
gacaaggattgctgggacgaaaacgtagaccggatgttacttgccctgagtacgcctgac
aattacctgaatgaggtggtggactacggctatgtgcggggggaagaaccttaccggtac
gtcaaacaggtttttgagcggtttgagcactatcgctccgtattacaggacatagggccc
gacatggcatcggttccctga
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