Robiginitalea biformata: RB2501_07400
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Entry
RB2501_07400 CDS
T00992
Name
(GenBank) Mur ligase domain protein/alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00470
D-Amino acid metabolism
rbi01100
Metabolic pathways
rbi01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RB2501_07400
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RB2501_07400
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rbi01011
]
RB2501_07400
Enzymes [BR:
rbi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RB2501_07400
Peptidoglycan biosynthesis and degradation proteins [BR:
rbi01011
]
Precursor biosynthesis
Racemase
RB2501_07400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
EAR16708
UniProt:
A4CIF0
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All DBs
Position
complement(901511..902623)
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AA seq
370 aa
AA seq
DB search
MPQSRDTVLEIDLGALAHNYRFLRDRLRPETRFLGVVKAYGYGSDSLAIALKLEALGADY
LAVAFTDEGTFLREGGVRLPILVLHPQPSGLDDLITHRLEPALYSLRILKMFLETARRRE
ARGFPVHLKFNTGLNRLGFWENDVEWIAGQLEGESSLTIRSAFSHLAASDDPGSNTFTQR
QIKSFAAIVADIREQLPGTPFFHLLNTSGILNFPDAQWDMVRSGIGLYGYGNDPEVDPLL
RPVARLRTRISQLHKIEPGEWVGYNKGYRAADFRTTATLPIGHADGIGRIYGKEHGAFHV
RGKRAPIIGNVCMDMTMIDVTGIPCKEGDEVVVFGNGHSAEDLARGAGTISYELLTGISR
RVAREILEEH
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaaagccgtgacacggtcctggagatcgacctgggggccctggcccacaactac
cggtttttgcgggacaggctgcgtcccgaaacccggttcctgggcgtggtcaaggcctac
ggctacggcagtgattccctggccattgcgctgaaactcgaagccctcggggccgattac
ctggcggtggccttcacggacgaaggcacctttttgcgagagggcggcgtccggctcccc
atcctggtgctgcacccccagccttccggcctggatgacctgattacccatcggctggag
ccggcgctctacagcctgcggattctgaaaatgttcctggaaactgcccggcggcgggag
gcgcgggggtttccggtccacctgaagttcaatacgggcctcaaccggctgggtttctgg
gaaaacgacgtggaatggattgccgggcaactggaaggggagtccagccttaccatccga
tccgccttctcccacctggcggcttcggacgaccccggctcaaacacttttacccaaagg
cagatcaaatcgtttgccgccatcgtggcggatatccgcgaacagttgcccggcacgcct
tttttccacctgctgaacacctccggcatcctgaatttcccggatgcccaatgggacatg
gtccgcagcggcatcgggctctacgggtacggcaacgatcccgaagtagacccactcctc
cgcccggtggcccggctgcgcacccgcatttcccagctccataaaatcgagcccggggaa
tgggtaggctacaacaaggggtaccgggctgcggatttccggaccacggctacgcttccc
atcgggcatgcagacggtatcggacggatttacggaaaggagcatggagcattccatgtc
cggggtaaacgcgctcccattatcgggaatgtttgcatggacatgacgatgatcgacgtc
acgggaatcccctgcaaggagggggacgaggtggtggttttcgggaatgggcattccgcc
gaagacctggctcgcggagccggcaccatttcctatgaactcctaacgggtatctcccgg
cgggtggcgcgggaaatcctggaagaacattga
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