Robiginitalea biformata: RB2501_07545
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Entry
RB2501_07545 CDS
T00992
Name
(GenBank) putative ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
rbi
Robiginitalea biformata
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RB2501_07545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rbi03019
]
RB2501_07545
03009 Ribosome biogenesis [BR:
rbi03009
]
RB2501_07545
03036 Chromosome and associated proteins [BR:
rbi03036
]
RB2501_07545
Enzymes [BR:
rbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
RB2501_07545
Messenger RNA biogenesis [BR:
rbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RB2501_07545
Ribosome biogenesis [BR:
rbi03009
]
Eukaryotic type
90S particles
RNase
RB2501_07545
Prokaryotic type
rRNA processing factors
RB2501_07545
Chromosome and associated proteins [BR:
rbi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
RB2501_07545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DUF2500
Motif
Other DBs
NCBI-ProteinID:
EAR16737
UniProt:
A4CIH9
LinkDB
All DBs
Position
934112..934849
Genome browser
AA seq
245 aa
AA seq
DB search
MTFPGNIFNSHPKEDGDFFLGISRILGFKPKSLEVYKRAFLHRSVNKKDKNGHPMNYERL
EFLGDSMLGTIISKHLYNEVPAGDEGYLTKMRSKIVSRKHLNELGKDLGLLNFVESRIPK
AHFGENIHGNVFEALVGAIYLDRGYKYCEKFIQSRVIEPYVDIEQLEGQVISYKSLVIEW
CQKQKKEFEFEVYEDTGNDPVKHFAVKLHIDGRILAKARATSKKKAEEKASRRAFFALQN
KMDSE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgacatttcccggcaacatctttaattcccatcctaaggaggatggggatttttttttg
gggatcagccggatcctggggttcaagccgaaaagcctggaggtttataagcgcgcattc
ctccaccggtcggtcaacaagaaagataagaacgggcacccgatgaattatgaacggctt
gaattcctgggggattccatgctggggaccatcatctccaagcacctgtacaatgaagta
cccgccggggatgagggctacctcaccaagatgcgctccaagatcgtcagccggaaacac
ctgaacgaactgggcaaggacctcgggttgctgaactttgtcgaaagccggattcccaag
gcccactttggggagaacatccacggcaacgtctttgaagcactggtcggggccatctac
ctggaccgggggtacaagtactgtgaaaagtttatccagagccgggtgattgagccctat
gtggatatcgaacaactcgaaggccaggtaatcagctacaagagcctggtgattgaatgg
tgccagaagcagaaaaaggaatttgaatttgaggtatatgaggatacgggcaacgacccg
gtgaagcattttgcagtcaaattgcatatcgacggccgcatcctggccaaggcccgcgcc
acctccaagaagaaagcggaagaaaaggcatcgcgacgtgcattctttgcactccagaat
aaaatggacagcgaatag
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