Robiginitalea biformata: RB2501_07775
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Entry
RB2501_07775 CDS
T00992
Name
(GenBank) Cys/Met metabolism PLP-dependent enzyme superfamily protein
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00260
Glycine, serine and threonine metabolism
rbi00270
Cysteine and methionine metabolism
rbi00450
Selenocompound metabolism
rbi00670
One carbon pool by folate
rbi01100
Metabolic pathways
rbi01110
Biosynthesis of secondary metabolites
rbi01230
Biosynthesis of amino acids
Module
rbi_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RB2501_07775
00270 Cysteine and methionine metabolism
RB2501_07775
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RB2501_07775
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RB2501_07775
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbi04147
]
RB2501_07775
Enzymes [BR:
rbi01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
RB2501_07775
Exosome [BR:
rbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RB2501_07775
SSDB
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Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_5
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
EAR16783
UniProt:
A4CIM5
LinkDB
All DBs
Position
979572..980738
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AA seq
388 aa
AA seq
DB search
MKKDLRFNSRTIHGGQHPDKAYGAVMPPIYQTSTYAQSSPGQHQGYEYSRSGNPTRHALE
ESLASIENGRFGLAFASGLAAMDAVVKLLKPGDEVLATNDLYGGSYRLFRKVFEPLGIRF
RFLGMQDAEAVASAIGPETRLVWVETPTNPMMQVIDIAAVAESCRSRGVLLAVDNTFATP
YLQRPLELGADIVMHSATKYLGGHSDVVAGGLVVKDKELADRLYFIQNASGAVCGPMDSF
LVLRGIKTLHVRMQRHCENGRAVAEFLAGHPGVERVYWPGFPDHPNHDIAAKQMTGFGGM
ISFVPRGARFEDAVRIVENLRVFTLAESLGGVESLAGHPASMTHASIPKDEREKSGVTDS
LIRLSVGIEDAADLTEDLERALAAMNRD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaccttcgtttcaattcgcgaaccatccacggcggacagcacccggacaaa
gcttacggtgcggtaatgccacccatttaccagacttccacctatgcccaatcgtccccc
ggacagcaccagggctacgagtactcccgcagcggcaacccaacgcgccatgccctggag
gaatccctggcgagtattgaaaacggccggttcgggctggctttcgccagtggcctggcg
gccatggatgccgtggtgaagctcttaaagccgggcgacgaagtcctggcgacaaatgat
ttgtacggcggcagttaccggttgttccgcaaagtcttcgagcccctggggatccgtttt
cgcttcctgggcatgcaggatgccgaagccgtcgcttcggcaattgggcctgaaacccgt
ttggtttgggtggaaaccccgaccaatccgatgatgcaggtgatcgatatcgcggccgtg
gcggaaagctgccgttcccggggcgttcttctggcggtggacaatacctttgccaccccc
tatttacagcgcccgctggagctcggggcggacattgtcatgcattccgcgaccaagtat
ctgggggggcacagcgatgtggtggccggcggcctggtggttaaagacaaagaactggca
gaccggttgtattttatccagaatgccagcggggccgtctgcggtccgatggacagcttc
ctggtgttacgggggatcaagaccttgcatgtgcggatgcagcgccactgcgagaacggc
cgggccgtagccgaattcctggcgggccaccccggggtggaacgggtctactggccgggt
ttccccgaccacccgaatcacgatattgccgcaaaacagatgaccgggtttggcgggatg
atttcctttgtgccacggggagcccgttttgaggatgcggtccggattgtcgaaaacctc
cgggttttcaccctggcggagtcgctgggcggagtggagagcctggcgggtcatccggca
agcatgacgcacgccagcatccccaaggatgaacgcgagaaaagcggggtaaccgattcg
ctgatccggctcagtgtggggatcgaggatgcggccgacctgacggaagatctggaaagg
gcgctggcggccatgaatcgggattga
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