Robiginitalea biformata: RB2501_07940
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Entry
RB2501_07940 CDS
T00992
Name
(GenBank) exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RB2501_07940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbi03400
]
RB2501_07940
Enzymes [BR:
rbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RB2501_07940
DNA repair and recombination proteins [BR:
rbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RB2501_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
EAR16816
UniProt:
A4CIQ8
LinkDB
All DBs
Position
1021710..1022519
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AA seq
269 aa
AA seq
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MAANAYFCTKINRLKIASYNVNGIRAAIRKGFLDWLVLAGPDVICLQETKAMKEQLDLEA
FEKAGYPYHYWFSAEKKGYSGVAILSRQRPDHVAYGTGIGYMDAEGRNIRADFGGVSIMS
LYLPSGTNIARLDHKLQYMADFQAYVDSLKREIPELVICGDYNICHRPIDIHDPVRNKNV
SGFLPVEREWIGNFIDSGFIDSFRHFNPDPHHYTWWTYRAGARAKNKGWRLDYGMVSRPL
EDRLARSVILPEARHSDHCPIMLELSESY
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
ttggccgccaatgcctatttttgcacgaaaatcaaccggttgaaaattgcatcttataat
gtgaacggtatccgggcggccatccggaaggggtttctggattggctcgtactggccggg
ccggatgtcatctgcctgcaggaaaccaaggcgatgaaggaacaactggacctggaagcc
tttgagaaggccgggtatccgtatcactactggtttagcgccgaaaagaaagggtatagc
ggggtggccatcctctcccgccagcgacccgaccatgtggcctacggcacggggatcggc
tatatggacgctgaggggaggaatatccgtgcagacttcggcggggtttccattatgagc
ctctacctgccttccggcacgaatatcgcccgcctggaccacaagctgcaatacatggcg
gatttccaggcgtacgtggacagcctgaagcgtgaaatcccggaactggttatttgcggc
gattacaacatttgccatcggcccatcgatatccacgacccggtacgcaacaagaacgtg
tccgggttcctgcctgtggaacgggaatggatcgggaattttatcgacagcgggtttatc
gacagcttccggcatttcaatccggatccccaccattatacctggtggacctaccgggcc
ggggcgcgggccaaaaacaaaggttggcgcctggattacgggatggtcagccggccgctg
gaagaccggctcgcccgctcggtgatcctgccggaagcccgccacagcgaccattgcccc
attatgcttgaactcagcgaatcatactga
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