Robiginitalea biformata: RB2501_09985
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Entry
RB2501_09985 CDS
T00992
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RB2501_09985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rbi03021
]
RB2501_09985
03400 DNA repair and recombination proteins [BR:
rbi03400
]
RB2501_09985
Enzymes [BR:
rbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RB2501_09985
Transcription machinery [BR:
rbi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RB2501_09985
DNA repair and recombination proteins [BR:
rbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RB2501_09985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
EAR17225
UniProt:
A4CJW7
LinkDB
All DBs
Position
1476029..1476982
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AA seq
317 aa
AA seq
DB search
MIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLASLEGFAITSVRIDKVEHEFSVIEGVV
EDVTEIILNLKQIRFKRQIDDVNEETVSISVSGKEQLTAGDFQKFISGFQVLNPDLVICN
MDPKVSINMEIIIEKGRGYVPAEENKKSNAPLGSIAVDSIFTPVRNVKYSIENYRVEQKT
DYEKLVFEILTDGSIHPKDALTEAAKVLIHHFMLFSDERITLEADEIAQTETYDEESLHM
RQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFGKKSLTELEELVIN
KGLNFGMDLSKYKLDKD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatagactcgaccgacttcgaggggaagtttgaattccgccccctggagcccggttat
ggtctgactgtcgggaatgcgctcaggagggtgctgctcgcctccctggaaggttttgcg
atcacttcggtgcgcatcgacaaggtggagcacgaattttcggtgattgaaggggttgtg
gaagatgtaaccgagatcatcctgaacctgaagcagatccgcttcaagcgtcagatcgac
gacgtcaacgaggaaactgtctcaatttccgtcagcggaaaggaacaactgaccgcaggg
gatttccaaaaattcatttccggattccaggtgctgaacccggacctggttatctgcaac
atggacccgaaggtgagtatcaacatggaaatcatcatcgaaaagggtcgcggatatgtt
cccgccgaggagaacaagaaatcgaatgcgccgctgggaagcattgccgtggactcgatt
tttaccccggtccggaatgtgaaatacagtattgagaactaccgggtggagcagaagacc
gactacgagaagctggtcttcgaaatcctgacggacggttccatccaccccaaggacgcg
ctcaccgaagccgccaaggtgctgatccaccattttatgctcttctccgacgagcggatc
accctggaagccgacgagattgcgcagacggaaacctacgacgaggaatccctgcacatg
cggcaattgctgaagaccaagctggtggacatggacctgagcgtccgggcgctgaattgc
ctgaaagccgccgaggtggatacccttggagacctggtgtccttcaacaagaacgacctg
atgaagttccgcaacttcggaaagaagtcactgaccgaactcgaggaactggttatcaac
aaagggttgaactttggcatggacctgtcaaaatataaattggataaggattaa
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