Robiginitalea biformata: RB2501_10252
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Entry
RB2501_10252 CDS
T00992
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi03030
DNA replication
rbi03430
Mismatch repair
rbi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RB2501_10252
03430 Mismatch repair
RB2501_10252
03440 Homologous recombination
RB2501_10252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rbi03032
]
RB2501_10252
03400 DNA repair and recombination proteins [BR:
rbi03400
]
RB2501_10252
Enzymes [BR:
rbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RB2501_10252
DNA replication proteins [BR:
rbi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RB2501_10252
DNA repair and recombination proteins [BR:
rbi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RB2501_10252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
EAR14699
UniProt:
A4CM07
LinkDB
All DBs
Position
complement(1520649..1522019)
Genome browser
AA seq
456 aa
AA seq
DB search
MYTVVDIETTGNGIYGNRITEIALFNIDQGRIADSYSTLVNPGCEIPAFITGLTGITTAM
VRNAPDFSEIAPKIDAFSSGRVFVAHSVNFDYPIVRKEFERCGLDFGRKKLCTVRLSRRV
FPGLRSYSLGKLCRSLEIPLSDRHRAAGDARATALLLLRAMEQPGGQDTIAGFLNARSRE
GTLPPHLPLESFRQLPEAPGIYFFKDSKGNVIYVGKAIDIRQRALGHFYDTSDRERRLCR
ETSQIDFELSGSDLVALLMEAAAIKKYFPKYNRAQKNIRPAFGLFSYPDRNGVIHLAFNR
LARGQQALRVFFSQTDARLFLEQLCTEFGLCAKFCHLQEGVATCSHFRVPQCAGICSGKQ
TVEAYNKKVRDALQSLEPGGNHLVIDEQGRQPDERGLVWVADGTYRGYGFVPKGQCPDRL
PDLEALITPQKHYPETEKIVQSYILKHPARVKRIPG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
ttgtacaccgtagtagacatagaaaccaccgggaacgggatttacggaaaccggatcacg
gaaattgccctgttcaatatcgaccagggccgtattgcggattcttattccaccctggta
aacccgggatgtgaaattccggcctttatcaccgggctcaccgggatcaccacggccatg
gtgcgcaatgccccggatttttcagaaatagccccaaagatcgatgccttctcctctggg
cgggtctttgtggcccactccgtgaattttgactatccgattgtccgaaaggagttcgaa
aggtgcggcctggactttgggcgtaaaaaactttgtaccgtgcggctttcgcgcagggtg
ttcccggggcttcgctcctacagcctgggtaagctttgtcgctccctggaaatcccgctc
tccgatcggcaccgcgccgccggggatgcacgggccaccgcattgctcctgctccgggcc
atggagcagcccggcggacaggacaccattgcaggcttcctcaatgcccggtcgcgggaa
gggacgctcccgcctcacctgcccctggagtccttccggcagctacccgaggcaccgggt
atatactttttcaaggattccaagggaaatgtcatctatgtaggcaaggcgatcgatatc
cgccagcgcgccctcgggcatttttacgatacctcagaccgggaacgcaggctctgccgg
gagacctcccaaatcgattttgaattatcgggttcggacctggttgccctgctgatggaa
gctgccgccatcaagaagtactttccaaaatacaaccgggcgcaaaaaaacatccgtccg
gctttcggactgttcagctatccggaccgaaacggcgtaatacacctggcgtttaacagg
ctcgcccggggccagcaagcgcttcgcgtcttcttcagccagacggatgcccgtttattt
ttggagcaactgtgtacggaattcgggttatgtgccaagttctgccacctgcaggaaggg
gtggcaacctgcagtcatttccgcgtgccgcaatgcgcgggtatttgctcgggaaaacaa
accgtggaagcctacaacaaaaaggtccgcgacgccttgcaatcgctggagcccggcggc
aaccacctggtaatagacgagcagggcaggcaaccggatgagcgaggcctggtttgggtg
gcagacgggacctaccgggggtacggctttgttcccaaaggccagtgcccggatcgcctt
ccggacctcgaggcgctgatcaccccccagaaacactatccggaaacggagaaaatagta
cagtcgtatatattgaaacacccggccagggtaaagcgtatccccgggtaa
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