Robiginitalea biformata: RB2501_11367
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Entry
RB2501_11367 CDS
T00992
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00300
Lysine biosynthesis
rbi00470
D-Amino acid metabolism
rbi01100
Metabolic pathways
rbi01110
Biosynthesis of secondary metabolites
rbi01120
Microbial metabolism in diverse environments
rbi01230
Biosynthesis of amino acids
Module
rbi_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RB2501_11367
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RB2501_11367
Enzymes [BR:
rbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
RB2501_11367
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
EAR14922
UniProt:
A4CMN0
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All DBs
Position
complement(1766729..1767991)
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AA seq
420 aa
AA seq
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MKGKDLLGIAKDFGAPVYVYDAGKIQSQFKRLTHAFRVVPKLKLNYAAKALSNLSILRLL
NNLGSGLDTVSIQEVQLGLLAGYRPEDIIYTPNGVSLEEIEEAASLGVQINIDNLSILEQ
FGSKHPDIPVCIRINPHVMAGGNSKISVGHIDSKFGISIHQIPHLLRIVELTKMKINGIH
MHTGSDILDIDVFLYASEILFDTAMHFKDLEFIDFGSGFKVPYKEGDIETNVEELGEKLG
GRFREFCDAYGRELTLAFEPGKFLVSEAGYFLARVNVVKQTTSTVFAGVDSGFNHLIRPM
LYGANHHIENLSNPGGKERYYSVVGYICETDTFASNRRIREISEGDILCFRNAGAYCFTM
ASNYNSRFRPAEVLWMDGKAHLIRKRENFEDLIRNQVDVPALAERPRQTADPNEAHSRVK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggaaggatctactggggattgcaaaggattttggtgcacctgtgtacgtttac
gacgcagggaagatccagtcgcagtttaaacggcttacccatgcattccgggtagttccc
aagctcaagctgaactacgccgccaaggctttgtccaacctgtccatcctccggttgctg
aacaacctggggagcggcctggataccgtctccatccaggaggtgcaactggggctcctg
gccggttaccgaccggaagacatcatttacacccccaacggggtgtccctggaggaaatc
gaggaagccgccagcctgggggtgcagatcaacatcgacaacctttccatcctggagcaa
tttggcagtaaacacccggacatcccggtgtgtatccggattaacccgcacgtgatggcc
gggggcaattccaagatatcggtgggccacatcgattcaaaattcggcatcagcatccac
cagatcccacacctgcttcgtatagtggagctcaccaaaatgaagatcaacgggatccat
atgcatacgggaagcgatatcctggatatcgacgtcttcctgtacgcctccgaaatcctg
ttcgatactgccatgcattttaaggacctggaattcatcgatttcggcagcggtttcaaa
gtcccctacaaagaaggagatatcgagacaaatgtggaggaattgggcgaaaagctcggg
ggtcgcttccgggagttctgcgacgcctacgggcgggaactcaccctggctttcgaaccc
ggcaaattcctcgtgagcgaggccgggtatttcctggccagggtaaacgtggtcaaacag
actacatcgactgtatttgcgggggtagactccggtttcaaccacctgatacgacccatg
ctctacggggccaaccaccatatcgaaaacctctccaatcccgggggcaaggagcgctat
tattccgtggtgggctacatttgcgaaacggacacctttgcaagcaaccgcaggatccgc
gagatatccgaaggggatatcctctgtttccggaatgccggtgcctattgcttcaccatg
gccagcaactacaattcccgcttccggcctgcagaagtgctgtggatggacggcaaggca
cacctgatccgcaaaagggagaattttgaagacctgatccgcaaccaggtggatgtcccg
gcgctggccgagcggcccaggcagacggcagaccccaacgaggcgcatagcagggtgaaa
taa
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