Robiginitalea biformata: RB2501_12442
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Entry
RB2501_12442 CDS
T00992
Name
(GenBank) putative isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00020
Citrate cycle (TCA cycle)
rbi00480
Glutathione metabolism
rbi00720
Other carbon fixation pathways
rbi01100
Metabolic pathways
rbi01110
Biosynthesis of secondary metabolites
rbi01120
Microbial metabolism in diverse environments
rbi01200
Carbon metabolism
rbi01210
2-Oxocarboxylic acid metabolism
rbi01230
Biosynthesis of amino acids
rbi04146
Peroxisome
Module
rbi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rbi_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RB2501_12442
09102 Energy metabolism
00720 Other carbon fixation pathways
RB2501_12442
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RB2501_12442
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RB2501_12442
Enzymes [BR:
rbi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
RB2501_12442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
EAR15137
UniProt:
A4CN95
LinkDB
All DBs
Position
complement(1972768..1974987)
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AA seq
739 aa
AA seq
DB search
MATIHYTKTDEAPALATASFLPIVQAFSRTAGIDITTKDISLAGRILAAFPEFLSEAQRI
PNDLEFLGELAKQPEANIIKLPNISASIPQLEEAITELQGQGYAIPDYPAEASSDEEKAI
KARYDKIKGSAVNPVLREGNSDRRAPRPVKNFARKNPHSMGAWSADSKSHVATMSSGDFK
SNEKSVTLGQGTRLRIEWVGAGGETRVLKEDIPTLDGEIVDGTVMEKKALLQFLEEQVAD
AKKSGVLFSVHLKATMMKVSDPIIFGHVLRTYFQEVFQRHDATFESLGIDANDGLENLLG
DLEQLPEDQAASIRKEIETAMEQGPSLAMVNSDKGITNLHVPSDIIIDASMPAMIRNSGR
MWNAQGKPQDTKAVIPDSSYAGVYQATIDDCKENGALDPKTMGTVPNVGLMAQKAEEYGS
HDKTFEIADPGTVRVVDQHSGEVLMEHAVSAGDIWRMCQVKDKPVRNWVELAVERARLSN
TPAVFWLDPQRAHDRELIAKVDAYLPQETRKELNIRVLSPVEATRYTLRRIREGKDTISV
TGNVLRDYLTDLFPILEVGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVEQFLEEGHLRW
DSLGEFMALAVSLEHYGQKNNSKKAGILGRSLDEATEKFLEENRSPSRKVNELDTRGSHF
YLALYWARALAKQEEEPALAGAFQKVASDLEAQTDTILQELLDAQGQPQDIGGYYLPDAE
KVRRAMRPSRSFNAILEQL
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccattcactataccaaaaccgacgaggccccggccctggcaactgcatccttc
ctccctatcgtacaggcattttcccgtactgcaggaatcgatatcaccaccaaggacatt
tccctcgccggtcggatactggccgctttccccgagttcctttcggaagcccaacgcatc
ccgaatgacctggaattcctgggcgaattggccaaacaacccgaagccaatatcatcaaa
ctgccgaatatcagcgcgtccatcccccaactggaggaggcgattaccgaattgcaggga
cagggatacgccatccccgactatccggccgaagcatcctcagacgaggaaaaagccatc
aaagcccgttatgacaagattaaaggaagtgcggtaaacccggtgctccgggaaggtaat
tcggaccgtcgcgccccgaggccggtcaaaaatttcgcccgcaaaaacccgcatagcatg
ggcgcctggagtgcagattccaaaagccatgtcgccaccatgtcttccggcgatttcaaa
tccaatgagaaatcggtgaccctgggccaggggacgcgccttcgcattgaatgggtaggc
gccggcggcgagacccgggtattaaaagaagatatcccgaccctggacggggagatcgta
gacgggaccgtcatggaaaagaaagcgctcctgcagtttttggaggagcaggtagccgac
gccaaaaaatcgggcgtgttgttttccgtccacctgaaagccaccatgatgaaggtctcc
gacccgattattttcgggcatgtcctgcgcacctacttccaggaggtattccaacggcac
gatgccacctttgaatccctgggtatcgacgccaacgacgggctggaaaacctgctcggg
gatctggagcaactgccggaagaccaggcggcttccatccgcaaggaaattgaaactgcc
atggaacagggcccgtccctggccatggtcaattccgacaaggggattaccaacctccac
gtgcccagcgatatcattatcgacgcttccatgcccgccatgatccggaattccggcagg
atgtggaatgcccaaggcaagccccaggacaccaaggcggtcatcccggacagcagctat
gccggcgtgtaccaggccaccattgacgattgcaaggaaaacggggccctggacccgaaa
accatggggactgtcccgaatgtcgggttgatggcccagaaggccgaagagtacggttcc
cacgacaaaacctttgaaattgccgatccgggcaccgtgcgcgtggttgaccagcacagc
ggggaagttttgatggagcacgcggtcagtgccggggacatctggcggatgtgccaggtt
aaagacaaacccgtgcgcaactgggtggaactcgccgtagagcgggcccgcctgtcaaac
accccggccgtattctggctggatccccaacgcgcccacgaccgggaactgattgccaag
gtagacgcctacctgccgcaggaaacccggaaggagttgaatatccgggtactttcccct
gtggaggccacccgctatacgctcaggcgcatccgggagggcaaggatacgatttcggta
acgggtaatgtccttcgcgattacctgacagaccttttccccatcctcgaagtggggacc
agtgcaaagatgctttcgattgtcccgctgatgaatggcgggggactgtttgaaaccggt
gccggcggatccgctcccaagcacgtggagcaattcctggaggaaggacacctgcgctgg
gattccctgggggaattcatggctttggccgtatccctagagcactacggacaaaagaac
aacagcaagaaggccggcatcctggggcggtccctggatgaagccaccgaaaaattcctg
gaggagaaccgatctccctcccggaaggtcaacgaactcgatacgcgcggcagccacttt
tacctggcgctctattgggccagggccctggcaaaacaggaggaggaacccgcattggcc
ggggcgttccaaaaggttgccagcgacctggaagcccaaaccgacaccattctgcaggag
ttgctcgacgcccaggggcaaccgcaggacattgggggctactacctgcccgacgctgaa
aaagtacgtcgcgccatgcgtccgagccgttcctttaacgccattttggaacagctttaa
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