KEGG   Robiginitalea biformata: RB2501_13644
Entry
RB2501_13644      CDS       T00992                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
rbi  Robiginitalea biformata
Brite
KEGG Orthology (KO) [BR:rbi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rbi03032]
    RB2501_13644
   03036 Chromosome and associated proteins [BR:rbi03036]
    RB2501_13644
   03400 DNA repair and recombination proteins [BR:rbi03400]
    RB2501_13644
DNA replication proteins [BR:rbi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RB2501_13644
Chromosome and associated proteins [BR:rbi03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    RB2501_13644
DNA repair and recombination proteins [BR:rbi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      RB2501_13644
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 Nucleoporin_FG2 HU-DNA_bdg
Other DBs
NCBI-ProteinID: EAR15375
UniProt: A4CKH6
LinkDB
Position
complement(2279533..2279805)
AA seq 90 aa
MNKTELIDAMAADAGITKAAAKKALESFLGNVESSLKKGNRVSLVGFGSWSVSRRNAREG
RNPSTGKTIHIPAKNVVKFKAGSELGDAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattaatcgatgccatggcagccgatgccggaatcaccaaagccgca
gccaaaaaggcgctggaatctttcctcggaaacgtagagagctctttgaaaaaaggaaac
cgcgtttctttagtaggattcggctcctggtctgtttccagaaggaatgctcgcgagggc
cgcaacccttctaccgggaaaaccatccatatcccggcaaaaaacgtagtaaagtttaaa
gcaggttccgaattaggagatgcggtaaactaa

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