Robiginitalea biformata: RB2501_15879
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Entry
RB2501_15879 CDS
T00992
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rbi
Robiginitalea biformata
Pathway
rbi00260
Glycine, serine and threonine metabolism
rbi00460
Cyanoamino acid metabolism
rbi00630
Glyoxylate and dicarboxylate metabolism
rbi00670
One carbon pool by folate
rbi00680
Methane metabolism
rbi01100
Metabolic pathways
rbi01110
Biosynthesis of secondary metabolites
rbi01120
Microbial metabolism in diverse environments
rbi01200
Carbon metabolism
rbi01230
Biosynthesis of amino acids
rbi01240
Biosynthesis of cofactors
rbi04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RB2501_15879
09102 Energy metabolism
00680 Methane metabolism
RB2501_15879
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RB2501_15879
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RB2501_15879
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RB2501_15879
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RB2501_15879
Enzymes [BR:
rbi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RB2501_15879
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
EAR15822
UniProt:
A4CLS3
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All DBs
Position
complement(2740188..2741540)
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AA seq
450 aa
AA seq
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MAVSPVITGGSAERKKPAQSLTKTAEMQRDQEIFDLIQAEKQRQINGLELIASENFASSQ
VMEAAGSVLTNKYAEGYPGKRYYGGCEVVDQVEQLAIDRAKELFGAVYANVQPHSGSQAN
AAVYQACLKPGDTILGFDLSHGGHLTHGSPVNFSGKLYRPVFYGVDRETGRLDYDKILEV
AEKEKPRMIIAGASAYSRDMDFAKFREIADQVGAFLLADIAHPAGLIAKGLLSDPIPHCH
FVTTTTHKTLRGPRGGMILMGEDFENPFDIRFKSGKLRSMSSLIDLAVFPGNQGGPLEHI
IAAKAVAYGEALSDGFLHYAIQVQKNADAMAKAFVSRDYHLISGGTDNHMMLIDLRNKGI
TGKDAENLLVTADITANKNMVPFDDQSPFVTSGIRFGTAAITTRGLVESDMEAVVSFIDR
VLSDPESTETAQAVKKEVNEMMGSRPLFAG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggccgtatcgcctgtaattacggggggtagcgcagaacggaaaaagccggctcaatcg
ttaaccaaaactgctgaaatgcaacgagaccaagaaatattcgacctgatccaggccgag
aagcaacgacaaatcaacgggttggaactcatcgcctccgagaattttgccagctcacag
gtgatggaggcggccgggtcggtccttactaataaatacgctgaaggttacccggggaaa
cgctattacggcggatgcgaggtggtggaccaggtagagcaactcgccatcgaccgtgcc
aaagaactctttggggcggtttatgcgaatgttcaaccccattcggggtcccaggcgaat
gccgcggtttaccaggcctgtttgaaacccggggatacaatcctcggcttcgacctttcc
catgggggccaccttacccacggctcgccggtgaatttttccggaaaactttaccgaccg
gtattttacggggtggacagggagacgggccgcctggattacgacaagatcctcgaggtc
gccgagaaggagaagccgcgcatgatcattgcgggcgcctcggcctactcccgggatatg
gactttgcgaaattccgcgagatagcagaccaggtaggggcattcctgctggcggatatt
gcgcatcctgcgggcctgattgccaaaggcctgctgagcgaccccatcccgcattgccat
tttgtgaccaccaccacccataaaacactccgcggcccgcggggcgggatgatcctgatg
ggtgaagatttcgaaaacccgtttgacatccggttcaaaagcgggaaactgcgctccatg
tcctcgctgatcgacctggcggtattcccggggaaccagggcgggccgctggagcatata
atcgccgccaaggccgtagcttacggcgaggccctttcggacggcttcctccactatgcc
atccaggtgcaaaagaatgcagatgccatggccaaagctttcgtctcccgcgactaccac
ctgatctccgggggtacggataaccacatgatgctcatcgacctgcggaataaaggaatt
accgggaaggatgcggagaacctgctggtgaccgcggatatcacagccaacaaaaacatg
gtgccttttgacgaccagtcgccttttgttacctcggggatccgtttcggaaccgccgcc
atcaccacccgcggcctggtagaatcggacatggaggccgttgtatcgttcatcgaccgg
gtgttgtccgatccggaatccactgaaacggctcaagccgtcaaaaaggaagtcaatgag
atgatgggaagccggccactttttgccgggtag
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