Rhizobium binxianense: PO860_01920
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Entry
PO860_01920 CDS
T11088
Name
(GenBank) PAS domain S-box protein
Organism
rbin Rhizobium binxianense
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_8
HisKA
PAS
PAS_9
PAS_4
HATPase_c_3
Diguanyl_cycl_sensor
PAS_7
Motif
Other DBs
NCBI-ProteinID:
WEA60663
LinkDB
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Position
complement(391741..395637)
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AA seq
1298 aa
AA seq
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MPAVQYPFIDIAVHARVRERFSRGEAMVLFSADLTRLLWANGAGAELFGHSAVYDLLDQG
VDRTDITFRQLETAARQLADIGDNRSLMIRVAKGFQRAQVQAAAELIRLSSGEKAILFSV
PVSAKPLAAGASAAQMLQGLDDPDTHMAVIGANGEVIAASPGFASLGISEQTAKTLISLA
GAHPDRLVKRPVATARGNLPAAVGKLSDEPALHLLFAVEAAIGDLDPIDAPALDPVETSA
LDSVDAPAQEESTPPAELLQDEPAVATGFTEIIDAVSGIEEVEETLEDITGESERPAETE
AGSTDAAVEEAGLAGHAEPESDGSVIDSSADEADEPAAIIEDDLASLTGAVETAPFVEAS
ETPVEDVPAAVHQEPAIAPTFVPEAPPAPELAAEPGFVFRPNSRATRFVWKIDAEGRFTE
VSHEFAEAVGPHASDIIGTAFGDIAALFNLDPDGKLSEALARRDTWSGKTILWPIEGTSL
VVPVDLAALPTYTRNRDFDGFRGFGVVRLSDAQEDPLALGLTLGHDGVGHDAASLGPVAE
PIGEMADEAEAAPQEVSAETIAAEEIEDQVFTAAEPETPETEETEETGSEEIAAEEPIVE
TSAPDNAAEKQAAGTDEAPAAWPSADLSDEPPALRIAETPNRRFSDKIVQLHNTSAGLTP
AEQANFREIAKRLEAFGASKEEPAASAPIEPAVTAPAEPSVAEMASFEGASGPTEVEAET
PADTADMTSPEEIAPQEAIFENAVEAEHEDEVAAEEPAGIAEDEATEGLEETVSQIEVLT
SFIPPRVKMTDGLSVGTVDQLPVAVLIHIGDALIHANPEFMRLTGYASLDALREVGGIEA
LLQRRELEEKAAGAGTMMLVKADDTLVPVTARLQSVRWEDANALMLALMPVEGKDDNRSN
VNRSEGRSEGRFEARPERMVEKVAKLQVEVEELRSILETATDGVVVIGTEGDIRSMNRSA
SALFNYDEQETRGKPFVMLFAHESQKAVLDYLNGLTGHGVASVLNDGREVIGREAAGGFV
PLFMTMGQLTSSNGYCAVIRDITQWKRTEDELRNAKGAAETANAHKTDFLARVSHEIRTP
LNAIIGFSDMMAGERFGPIGHPRYIEYANDIGRSGRHVLDIVNDLLDISKIEAGEMDLDF
AAVGLNEAVSEAVALVQPQANGQRVIIRTALSHAVPDVVADLRSIKQIALNILSNAIRFT
PSGGQIVVSTSYETNGSVVLRVRDTGIGMTRSELDQAMKPFRQVSSTQSRHRGDGTGLGL
PLTKAMVDANRAVFSINSAPNEGTLVEITFPSQRVLAG
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagtccaatatccgttcatcgatatcgccgtgcatgcacgggtgcgggaacgc
ttttcacgtggcgaggcgatggtgctgttttcggccgacctgacccgcttgctctgggcg
aacggtgcgggcgcggagcttttcggccattcggcggtctatgacctgctcgatcaaggc
gtcgaccggaccgacatcaccttccgccaattggaaacggcggcgcgccagcttgccgat
atcggtgacaacagaagcctgatgatccgcgtcgccaagggctttcagcgtgcgcaggtg
caggcggcggccgaactgatccggctctcctcaggcgaaaaggccatcctgttttcggtg
ccggtctcggcaaaaccgctggcggccggcgcctcggcggcgcagatgctgcaagggctt
gatgatcccgatacgcatatggcggtgatcggcgccaatggcgaggtcatcgccgcctcg
ccgggctttgcctcgctggggatttccgaacagaccgcaaagaccctgatcagccttgcc
ggcgcccatcccgatcggctggtgaagcgtcccgtcgccaccgccagaggcaatcttccg
gccgccgtcggcaagctcagcgacgagccggcgctccatctgctttttgccgtggaggcc
gcgatcggcgatctcgacccgatcgatgcccccgcgctcgacccggtcgaaacatcagcg
ctcgactctgtcgatgcgcccgcgcaggaagaaagcacgccgcccgccgaactgcttcag
gacgagcctgcggtcgccaccggcttcaccgagattatcgacgcagtctcggggatcgaa
gaggtcgaagagacgctcgaggacatcaccggcgaaagcgaacggccggccgagacggaa
gcgggatccacagacgcggcagtcgaagaggctggtctcgccggacatgccgagccggag
agtgacggcagcgtgatcgacagcagcgcggatgaagccgatgagcctgcggcgatcatc
gaggacgaccttgcctccctcaccggggccgtggaaacggcaccgtttgtcgaggccagc
gaaacgcctgtcgaagatgtgccggcagcggttcaccaagaacccgccatcgccccgact
ttcgtccccgaagcgccccctgcccctgagcttgcggctgagcccggcttcgtcttcagg
ccgaacagccgcgccacgcgcttcgtctggaagatcgacgccgagggccgtttcaccgag
gtcagccacgaatttgccgaggccgtcggtccgcatgcgtcggacatcatcggcaccgcc
ttcggcgatatcgccgccctcttcaatctggatccggacggcaagctttccgaggcgctc
gcccgccgcgacacatggtcgggcaagacgatcctctggccgatcgaaggcaccagcctc
gtcgttccggtcgatctggcggcgctgccgacctatacccgcaaccgcgacttcgacggt
ttccgcggcttcggcgtcgtccggctttccgatgcgcaggaagatccgctggcgctcggc
ctgacgctcggccatgatggcgtcggccatgatgcggcaagcctcggcccggtggccgag
ccgatcggcgaaatggcggatgaagcggaagccgcgccccaagaggtttcggccgaaacc
atcgcggcagaagagatcgaagaccaggtgtttacggcagccgagccggagaccccagag
accgaggagaccgaagagacaggatcggaagagatcgctgccgaagagccgatcgtcgag
acatcggccccggacaatgccgcagaaaaacaggcggccggcaccgacgaagcacctgcc
gcctggccgtcagcggatctttcggacgagccgccggcgctgcgcattgccgaaacgccc
aatcgccgtttctccgacaagatcgttcagctccacaataccagcgccggactgacgccc
gccgaacaggcgaatttccgcgagatcgccaagcggctcgaggccttcggcgccagcaag
gaagagcctgccgcctcagcgccgatcgaacccgccgtcacggcgccggcagaaccttcc
gtcgcggaaatggccagcttcgaaggggcctccggccccacagaggtcgaggccgaaact
cccgccgacacggcggatatgacctcgcccgaggaaatcgcgccgcaagaagcgatcttc
gagaatgccgtcgaggccgagcacgaagacgaggtcgccgccgaagagccggctggtatc
gccgaggacgaggcgacggaagggctggaggagacggtcagtcagatcgaggttctcacc
agcttcatcccgccgcgcgtcaagatgaccgacgggctttcggtgggaacggtcgaccag
ttgcctgtcgccgtgctcatccatatcggcgatgcgctgatccacgccaatccggaattc
atgcggctgaccggctatgcttcgctcgacgcgctgcgtgaggtgggcggcatcgaagcc
ctgctgcagcgccgcgaactcgaggaaaaggctgccggcgccggcaccatgatgctggtc
aaggccgacgatacgctggtaccggtaacggcgcggctgcaatcggtgcgctgggaagac
gccaacgccctgatgctggcgctgatgccggtcgaaggcaaggatgacaaccgcagcaac
gtaaaccggtccgagggccgctccgagggtcgtttcgaagcccgtcccgagcggatggtc
gagaaggtcgccaagcttcaggtcgaagtggaagaattgcgctcgatcctggaaacggca
accgacggcgtcgtcgtcatcggcacggaaggcgacatccgctcgatgaaccggtcggcc
agcgcgcttttcaattacgatgagcaggagacgcgcggcaaacccttcgtcatgctgttt
gcccatgagagccagaaggccgtgctcgattatctgaacggcctcaccggccatggcgtg
gccagtgtactgaacgacgggcgcgaagtgatcggccgcgaggccgccggcggcttcgtg
ccgctgttcatgacgatgggccagctcacctcctccaacggctattgcgccgtcatccgc
gatatcacccagtggaagcggaccgaggacgagttgcgcaacgccaagggtgcggccgaa
accgccaacgcccacaagaccgatttcctcgcccgcgtcagccatgaaatccgcacgccg
ctcaatgcgatcatcggcttttccgacatgatggccggcgagcgcttcgggccgatcggc
catccccgttacatcgaatacgccaacgacatcggccgttccggccggcacgttctcgat
atcgtcaacgatctgctcgacatttcgaagatcgaggcgggcgagatggatctcgatttt
gcggccgtcggtctcaacgaggcagtctccgaggccgtggcgctggtccagccgcaggcg
aacggccaacgcgtcatcatccgcacggcgctgtcgcatgcggtgcctgatgtcgtggcg
gacctgcgctcgatcaagcagattgcgctcaacatcctgtcgaacgccatccgtttcacc
ccgtccggcggacagatcgtcgtttccacctcctatgagacgaatggcagcgttgtgctc
agggtgcgcgataccggcatcggcatgacgcgcagcgaactcgaccaggcgatgaagccg
ttccggcaggtctcctcgacccaatcgcgccatcgcggcgacggcaccgggctcggcctg
ccgttgaccaaggcgatggtcgatgccaaccgggcggtgttctcgatcaattcggcgccg
aacgagggcacgctcgtcgagatcacctttccgtcgcagcgggtgctggcgggctga
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