KEGG   Rhizobium binxianense: PO860_07050
Entry
PO860_07050       CDS       T11088                                 
Name
(GenBank) vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rbin  Rhizobium binxianense
Pathway
rbin00230  Purine metabolism
rbin00240  Pyrimidine metabolism
rbin01100  Metabolic pathways
rbin01232  Nucleotide metabolism
Module
rbin_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rbin_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rbin00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    PO860_07050
   00240 Pyrimidine metabolism
    PO860_07050
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rbin03400]
    PO860_07050
Enzymes [BR:rbin01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     PO860_07050
DNA repair and recombination proteins [BR:rbin03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    PO860_07050
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD TACO1_YebC_N CPL GrpE Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: WEA61611
LinkDB
Position
complement(1409110..1412925)
AA seq 1271 aa
MRIERRFTKAGQGAYADIEFRKATSEIKNPDGSIVFRLENIDVPAQFSQVATDVLAQKYF
RKAGVPTRLKKVEENDVPSFLWRSVPDDAALKALPKDEQTGSEIDARQVFDRLAGTWTYW
GWKGGYFSSEEDAAAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSMLRG
EGEKLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEEYINWKVKE
EQKVAALVTGSKVVAKHLKAIMKACFNCEGGDNGDCFDPAKNPALKREIRAAKKDQVPEN
YVQRVIQFARQGYKDLQFKTYDTDWDSEAYLTVSGQNSNNSVSIKDDFLRAVENDGDWNL
TARKDGRVMKTLKARDLWETISYAAWASADPGIHFNTTMNDWHTSPAGGPIRGSNPCSEY
MFLDDTACNLASLNLLQFKDKATKRINIADYEHAVRLWTVVLEVSVMMAQFPSKRIAELS
YEYRTLGLGYANIGGLLMSSGIPYDSTEARAIAGSLTAIMTGICYATSAEMAAELGPFPN
FAPNRESMLKVIRNHRRAAHGETSGYEALSINPVALIHSENPDQDLVAHAKSAWDKALEL
GEQHGYRNAQVSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPDAL
RTLGYSESQIAEIEAYAVGHGNLNQAPSVNPSTLRAKGFTDEKVEAVNAALKSAFDIKFV
FNQWTLGADFLKDTLKVSDEQLADMSFSLLDHIGFSKKDIEAANIHVCGAMTLEGAPFLK
AEHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAY
LLSWKLGLKANALYRDGSKLSQPLNASLIEDENEEDALEELLQAPVAAQAVTITEKIIER
VIERVSREREKLPNRRQGYTQKAAVGGHKVYLRTGEFGDGRLGEIFIDMHKEGAAFRAMM
NNFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVIGNDAIKNATSILDYVFRELAVSYL
GRHDLAHVDTSDFSNTALGKGIQEGKTNLLSTGWTRGYKPTLVSGTGGERQAGEPKGAAT
AAPARAASTGTVTAFAGAAARKLEPTVAVSTSEIVAFKRDYEERAKELAEEIAEEVLEEI
ASDATALFSDKAAADAATAKTEAKKVEAERRQRSIMQGYTGNMCSECQNFTMVRNGTCEK
CDTCGATSGCS
NT seq 3816 nt   +upstreamnt  +downstreamnt
atgcgcatcgaacgtcgtttcacgaaggccggccaaggcgcctatgcggatatcgaattc
cgcaaggcgacgagcgagatcaagaaccccgatggttcgatcgtgttccgcctcgagaac
atcgatgttcccgcgcagttctcccaggtcgcgaccgacgttctggcgcagaagtatttc
cgcaaggccggcgttcccactcggctgaagaaggtcgaggaaaacgacgttccctccttc
ctgtggcgctccgttcccgacgatgctgcactgaaggccctgccgaaggacgaacagacc
ggctccgaaatcgatgcgcgccaggtcttcgaccgtcttgccggtacctggacttattgg
ggctggaagggtggctatttctcctccgaagaagatgctgccgccttcaaggacgagctt
gcctatatgctcgccacccagcgcgtcgccccgaactcgccgcagtggttcaacaccggc
ctgcactgggcctacggcatcgacggtcccggccagggccatttctacgtcgatcccttc
accggcaagctgaccaagtccaagtcggcctacgaacacccgcagccgcatgcctgcttc
atccagtcggtcgaggacgatctcgtcaacgaaggcggcatcatggatctttgggtgcgt
gaagcccgcctgttcaagtacggctccggcaccggctccaacttctcgatgctgcgcggc
gaaggtgaaaagctttccggcggcggccgctcctccggcctgatgagcttcctgaagatc
ggcgaccgcgccgccggcgccatcaagtcgggcggcacgacgcgccgcgccgccaagatg
gtggtcgtcgatatcgaccatcccgatatcgaggaatacatcaactggaaggtcaaggaa
gaacagaaggtggcggccctcgtcaccggctcgaaagtggtcgccaagcatctgaaggcg
atcatgaaggcctgcttcaactgcgaaggcggcgataacggcgattgcttcgacccggcc
aagaaccctgccctgaagcgcgaaatccgcgccgccaagaaggatcaggttcccgagaac
tacgtccagcgcgtcatccagttcgcccgccagggctacaaggatctgcaattcaagacc
tacgacacggattgggattcggaagcctacctgacggtctcgggccagaactccaacaac
tccgtctcgatcaaggacgacttcctgcgcgccgtcgaaaatgacggcgattggaacctg
accgcccgcaaggacggccgggtgatgaagacgctgaaggcacgcgatctctgggaaacg
atttcctatgccgcctgggcctcggccgatccgggcatccacttcaacacgacgatgaac
gactggcacacctcgccggccggcggcccgatccgcggctcgaacccgtgctcggaatac
atgttcctcgacgacacggcctgcaaccttgcctcgctgaacctcctgcagttcaaggac
aaggccaccaagcgcatcaatatcgccgattacgaacatgccgtccgcctgtggaccgtc
gtgctcgaagtctcggtgatgatggcgcagttcccgtcgaagcgcattgccgaactctcc
tacgaataccgcacgctcggcctcggatatgccaatatcggcggcctgctgatgtcgtcg
ggcattccctacgactctaccgaggctcgcgccatcgccgggtcgctgaccgcgatcatg
accggcatctgctatgcgacctcggccgaaatggctgccgagctcgggccgttcccgaat
ttcgcgccgaaccgcgagagcatgctcaaggtcattcgcaaccatcgccgggccgcccat
ggcgaaacctcaggctatgaggccctgtcgatcaacccggtcgcgctgatccattcggaa
aaccccgaccaggatctcgtcgcccacgccaaatcggcctgggacaaggcgctcgagctc
ggcgaacagcacggctatcgcaatgcccaggtctcggtgatcgcgcccaccggcacgatc
gggctcgtcatggattgcgacaccaccggcatcgagcccgacttcgccctcgtcaagttc
aagaagctcgccggcggcggctacttcaagatcatcaaccgcgccgtacccgacgcgctg
cgcacgctcggctattcggaaagccagatcgccgagatcgaggcctatgccgtcggccac
ggcaacctgaaccaggcaccgtcggtcaacccatcgacgctgagggccaagggcttcacc
gacgagaaggtcgaagccgtcaacgccgcgctgaagagcgccttcgacatcaagttcgtc
ttcaaccagtggacgctcggcgccgacttcctcaaggacacgctgaaggtttccgacgaa
cagttggccgacatgagcttcagcctgctcgaccatatcggcttctcgaagaaggacatc
gaagccgccaacatccatgtctgcggtgcgatgacgctggaaggcgcgcccttcctcaag
gccgagcacctgccggtcttcgattgcgccaatccctgcggcaagatcggcaagcgctac
ctctccgtggaaagccatatccgcatgatggcggcggcccagcccttcatctcgggtgcg
atttccaagacgatcaacatgccgaacgaggcgaccgtcgaggattgcaagaacgcctac
ctgctctcctggaagcttggcctcaaggccaatgcgctctatcgcgacggctcgaagctg
tcgcagccgctcaacgcctcgctgatcgaagacgagaacgaggaggatgcgctggaggaa
ctgctgcaggcgccggtcgccgcccaggccgtcaccatcaccgagaagatcatcgagcgg
gtgatcgaacgggtttcgcgcgaacgcgagaagctgccgaaccgccgccagggctatacc
cagaaggccgccgtcggcggacacaaggtctatctccgcaccggcgaattcggcgacggc
cgcctcggcgagatcttcatcgacatgcacaaggaaggcgctgccttccgggcgatgatg
aacaatttcgccatcgccatctcgctcggcctgcagtacggcgtgccgctcgaggaatat
gtcgaggccttcaccttcaccaagttcgagccggccggcatggtcatcggcaatgatgcg
atcaagaacgccacctcgatcctcgactatgtcttccgcgagcttgctgtttcctatctc
ggccgtcacgatctcgcgcatgtcgatacgtcggacttctcgaacaccgccctcggcaag
ggcatccaggaaggcaagaccaacctgctctccaccggctggacccgcggctacaagccg
acgctcgtctccggcactggcggtgaacgccaggccggcgaacccaagggtgctgccacc
gcagcccctgcccgagccgcctccaccggcacggtaacagcatttgcaggtgccgctgcc
cgcaagctggaaccgacggttgccgtctccacctccgaaatcgtcgccttcaagcgcgat
tacgaggagcgcgccaaggaattggccgaggaaatcgccgaagaggtactcgaggaaatc
gccagcgacgccaccgccctcttctccgacaaggcggcagccgacgcggcaacggcgaag
accgaagccaagaaggtcgaagccgaacgccgccagcgctcgatcatgcagggctatacc
ggcaacatgtgctcggagtgccagaacttcacgatggtgcggaacggcacctgcgaaaag
tgcgacacatgcggtgcgacgagcgggtgcagctga

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