KEGG   Rhizobium binxianense: PO860_08410
Entry
PO860_08410       CDS       T11088                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rbin  Rhizobium binxianense
Pathway
rbin00010  Glycolysis / Gluconeogenesis
rbin00020  Citrate cycle (TCA cycle)
rbin00260  Glycine, serine and threonine metabolism
rbin00280  Valine, leucine and isoleucine degradation
rbin00310  Lysine degradation
rbin00380  Tryptophan metabolism
rbin00620  Pyruvate metabolism
rbin00630  Glyoxylate and dicarboxylate metabolism
rbin00640  Propanoate metabolism
rbin00670  One carbon pool by folate
rbin00785  Lipoic acid metabolism
rbin01100  Metabolic pathways
rbin01110  Biosynthesis of secondary metabolites
rbin01120  Microbial metabolism in diverse environments
rbin01200  Carbon metabolism
rbin01210  2-Oxocarboxylic acid metabolism
rbin01240  Biosynthesis of cofactors
Module
rbin_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rbin_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rbin_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rbin_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rbin00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    PO860_08410 (lpdA)
   00020 Citrate cycle (TCA cycle)
    PO860_08410 (lpdA)
   00620 Pyruvate metabolism
    PO860_08410 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    PO860_08410 (lpdA)
   00640 Propanoate metabolism
    PO860_08410 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    PO860_08410 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    PO860_08410 (lpdA)
   00310 Lysine degradation
    PO860_08410 (lpdA)
   00380 Tryptophan metabolism
    PO860_08410 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    PO860_08410 (lpdA)
   00670 One carbon pool by folate
    PO860_08410 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rbin04147]
    PO860_08410 (lpdA)
Enzymes [BR:rbin01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     PO860_08410 (lpdA)
Exosome [BR:rbin04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   PO860_08410 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_binding_3 FAD_oxidored HI0933_like NAD_binding_8 GIDA DAO Thi4 Amino_oxidase Lys_Orn_oxgnase 2-Hacid_dh_C 3HCDH_N
Other DBs
NCBI-ProteinID: WEA61859
LinkDB
Position
1685006..1686469
AA seq 487 aa
MAESYDVIIIGSGPGGYVAAIRAAQLGLKTAIVEREHMGGICLNWGCIPTKALLRSAEVL
DHANHFKDYGLVLEGTVKPDAKAVVGRSRAVSARLNAGVGFLMKKNKIDIIWGEGKLSKA
STGAQPGEIVVGKSSKPVVEPQHPLPKNVKGEGTYTAKHIIIATGARPRALPGIEPDGKL
IWTYFEALKPDALPKSLIVMGSGAIGIEFASFYRSMGVDVTVVEVMPTIMPVEDAEITAI
ARKQLEKRGLKIFTSAKVTKVEKGAGSVTAHVETSDGKVQQITADRLISAVGVQGNIENL
GLEALDIKTDRGCVVTDGYGKTNIAGIYAIGDVAGPPMLAHKAEHEGVVCVEKIAGLPNV
HPTDKGKVPGCTYCNPQVASVGLTEAKAKELGRDIRVGRFSFAANGKAIALGEDQGMVKV
IFDKKTGELLGAHMVGAEVTELIQGFVVAMNLETTEEELMHTIFPHPTVSETMKEAVLDA
YGRVLNA
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggctgaatcctacgacgtcatcatcatcggctccggccccggcggctacgtcgccgcc
atccgtgcagcccagctcggcctcaagaccgcgatcgtcgagcgcgagcatatgggcggc
atctgcctgaactggggctgcatacccacaaaggcgctgctgcgctcggccgaggtgctc
gaccatgccaatcacttcaaggattacggcctggttctcgaaggcacggtcaagccggat
gccaaggccgtcgttggccgctcgcgcgccgtctccgcccgcctgaatgccggcgtcggc
ttcctgatgaagaagaacaagatcgacatcatctggggcgaaggaaagctttccaaggct
tcgactggggctcagcccggcgagatcgtcgtcggcaagtcgtcgaagccggtggtcgaa
ccgcagcacccgctgccgaaaaacgtcaagggcgagggcacctacaccgccaagcacatc
atcatcgcgaccggcgcccgtccgcgtgcgctgcccggcatcgagccggacggcaagctg
atctggacctatttcgaggcgctgaagccggatgcgctgccgaagtcgctgatcgtcatg
ggttcgggcgcgatcggcatcgaattcgcaagcttctaccgctcgatgggcgtcgacgtg
acggttgtcgaagtcatgccgaccatcatgccggtcgaggatgccgaaatcaccgccatc
gcccgcaagcagctggaaaagcgcggcctcaagatcttcaccagtgccaaggttaccaag
gtcgagaagggtgcgggcagcgtcaccgcccatgtcgaaacttcagatggcaaggtgcag
cagatcaccgccgaccggctgatttcggccgtcggcgttcagggcaatatcgaaaacctc
ggcctcgaggcgctcgacatcaagaccgaccgcggctgcgtcgtcaccgacggttacggc
aagaccaatatcgctggcatctatgcaatcggcgatgtcgccggcccgccgatgctggcc
cacaaggccgagcatgaaggtgtggtctgcgtcgaaaagatcgccggcctgccgaacgtt
catcccaccgacaagggcaaggtcccgggctgcacctattgcaatccgcaggtcgcctcc
gtcggcctcaccgaagccaaagccaaggagctgggccgcgacatccgcgtcggccgcttc
tccttcgcggcaaacggcaaggcgatcgcgctcggcgaagaccagggcatggtcaaggta
atcttcgacaagaagaccggcgagctgctcggcgcccatatggtcggcgccgaagtcacc
gagctcatccagggtttcgtcgtcgcgatgaacctcgaaacaaccgaggaagagctgatg
cacacgatcttcccgcatccgactgtgtccgaaacgatgaaggaagcggtgctcgatgcc
tatggccgtgtgctgaacgcttga

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