Rhizobium binxianense: PO860_09660
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Entry
PO860_09660 CDS
T11088
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rbin Rhizobium binxianense
Pathway
rbin00260
Glycine, serine and threonine metabolism
rbin00630
Glyoxylate and dicarboxylate metabolism
rbin00670
One carbon pool by folate
rbin00785
Lipoic acid metabolism
rbin01100
Metabolic pathways
rbin01110
Biosynthesis of secondary metabolites
rbin01200
Carbon metabolism
Module
rbin_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rbin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PO860_09660 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PO860_09660 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PO860_09660 (gcvP)
00670 One carbon pool by folate
PO860_09660 (gcvP)
Enzymes [BR:
rbin01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
PO860_09660 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WEA62093
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Position
1931491..1934355
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AA seq
954 aa
AA seq
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MTTPTEFQFTDYQPYDFANRRHIGPSPAEMTEMLKVIGYNSLDRLIDATLPPSIRQKAPL
VWGAPMTEREALDKLRDTANKNKVLVSLIGQGYYGTITPPVIQRNILENPAWYTAYTPYQ
PEISQGRLEALLNYQTMISDLTGLDVANASLLDEATAAAEGMAMAERVSKSKAKAFFVDA
DCHPQTIALIRTRAEPLGWSVIVGNPFTDLDPVDVFGAIFQYPGTHGHVHDFTGLIARLH
QAGAVAVVAADILALTLLKSPGEMGADIAIGSSQRFGVPVGYGGPHAAYMAVKDAIKRSM
PGRLVGVSVDARGNRAYRLSLQTREQHIRREKATSNICTAQVLLAVMASMYAVFHGPKGI
KAIAQQVHQKAVLMAKGLEKLGYKVEPDSFFDTITVDVGHMQGLILRAAVAEGVNLRKVG
ETRIGMSLDERTRPATLEAVWRAFGGNFTIADFEPSYRLPKGLLRTSDYLTHPIFHMNRA
ESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFSDIHPFVPSDQALG
YREMIDDLIEKLCAVTGYDAFSMQPNSGAQGEYAGLLTIRNFHIANGEGHRDVCLIPTSA
HGTNPASAQMVGMKVVVVKVRENGDIDLDDFRAKAEEHAANLSCCMITYPSTHGVFEETV
KEICDLVHANGGQVYLDGANMNAMVGLSRPGDIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKAHLAAHLPGHPETDGRSGAVSAAAFGSASILPISWSYCLMMGGEGLTQATKVAILNA
NYIATRLKGAYDVLYKSKTGRVAHECIIDTRPLVDSAGVTVDDVAKRLIDCGFHAPTMSW
PVAGTLMIEPTESETKAELDRFCEAMLAIREEARAIEDGRMDKANNPLKNAPHTVEDLVG
EWDRPYSREQACFPPGAFRVDKYWSPVNRVDNVYGDRNLICTCPPVEAYAEAAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccgacagaattccagttcaccgactaccagccttacgatttcgccaatcgc
cgccatatcggcccctcgccggctgaaatgaccgagatgctgaaggtgatcggctataac
agcctcgacaggctgatcgacgccacgctgccgccctcgatccgccagaaggcgccgctt
gtctggggcgcgccgatgaccgagcgcgaggcgctcgataagctgcgcgacaccgccaac
aagaacaaggtgctggtgtcgctgatcggccagggttactacggcacgatcacaccgccc
gtcatccagcgcaacatcctggagaaccccgcctggtacacggcctatacgccctatcag
ccggagatcagccagggtcgcctggaagcgctgttgaactaccagacgatgatctcagac
ctcaccggcctcgacgtcgccaatgcctcactgctcgacgaggcgactgctgccgccgaa
ggcatggcgatggccgagcgcgtctccaagtcgaaggccaaggccttcttcgtcgatgcc
gactgccacccgcagaccatcgccctcatccgcacccgcgccgagccgctcggctggagc
gtcatcgtcggcaatcctttcaccgatctcgatcccgtcgatgtcttcggcgcgatcttc
caatatcccggcacgcatggccacgtgcatgatttcaccggcctgatcgcccgcctgcac
caggccggcgccgtcgccgtcgttgccgccgatatcctggcgctgacgctgctgaaatcg
cccggtgagatgggtgccgatatcgccatcggctcctcgcagcgcttcggcgtcccggtc
ggctatggcggcccgcatgcggcctatatggctgtgaaagacgccattaagcgttccatg
cccggccgcctcgtcggcgtttccgtcgatgcccgcggcaaccgcgcctatcgcctgtcg
ctgcagacccgcgagcagcatatccgccgcgagaaggcgacctcgaacatctgcaccgcc
caggtgctgctcgccgtcatggcctcgatgtatgccgtcttccacggcccgaaaggtatc
aaggcgattgcccagcaggtgcaccagaaggccgtgctgatggccaagggcctggaaaag
ctcggctataaggtcgagccggacagtttcttcgacacgatcaccgtcgacgtcggccac
atgcaggggctcatcctgcgcgccgccgtcgccgaaggcgtcaatctgcgcaaggtcggg
gaaaccaggatcggcatgagcctcgatgagcgcacgcggcccgcgacgctcgaagccgtc
tggcgcgccttcggcggcaattttaccattgccgatttcgagccttcctaccgcttgccg
aagggcctgctccgcaccagcgattacctcacccatccgatctttcacatgaaccgcgcc
gaaagcgagatgacgcgttacatccgccggctctccgaccgcgatctggcgctcgaccgc
tcgatgatcccgctcggctcctgcacgatgaagctgaatgcgacggcggagatgctgccg
atcacctggccggaattttccgacatccatcccttcgtgccatcagaccaggcgctcggc
taccgcgagatgatcgacgatctgatcgagaagctctgcgccgtcaccggctacgacgcc
ttctccatgcagccgaattccggcgcccaaggcgaatatgccggcctgctgacgatccga
aactttcatatcgccaatggcgagggccatcgcgacgtctgcctgatcccaacctctgcg
catggcaccaacccggcctcggcccagatggtcggcatgaaggtggtggtcgtcaaggtg
cgtgaaaacggcgatatcgatctcgacgatttccgcgccaaggctgaggagcatgcggca
aacctctcctgctgcatgatcacctacccctcgacgcacggcgtgttcgaggaaaccgtc
aaggaaatctgtgatctcgtgcatgccaacggcggccaggtctatctcgacggcgccaac
atgaatgccatggtcggcctgtcccgccccggtgacatcggctccgacgtcagccacctg
aacctccacaagaccttctgcatcccgcatggcggcggcggtcccggcatgggcccgatc
ggggtcaaggcgcacctggcggcgcacctgcctggccatcccgagaccgacggccgttcc
ggggcggtttcggcagcggccttcggctcggcctcgatcctgccgatctcctggagctat
tgcctgatgatgggcggcgaaggactgacgcaggcaaccaaggtggcgatcctcaacgcc
aactatatcgccacccggctgaagggcgcctatgacgtgctctacaagtcgaagaccggc
cgcgtcgcgcatgaatgcatcatcgacacccgcccgctggtcgacagcgcaggcgtcacc
gtcgacgatgtcgccaagcgtctgatcgactgcggcttccatgcgccgacgatgagctgg
ccggtcgccggcacgctgatgatcgagccgacggaaagcgagaccaaggccgaactcgac
cgtttctgcgaggcgatgctggcaatccgcgaggaagcccgcgccatcgaagacggccgc
atggacaaggccaacaacccgctgaagaacgccccgcacacggtggaagacctcgtcggc
gaatgggatcgcccctatagccgagaacaggcctgcttcccgcccggcgccttccgcgtc
gacaaatactggtcgcctgttaatcgcgtcgacaacgtctacggcgaccgcaacctgatc
tgcacctgcccgccggtcgaggcctacgctgaggccgccgagtag
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