Rhizobium binxianense: PO860_11545
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Entry
PO860_11545 CDS
T11088
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rbin Rhizobium binxianense
Pathway
rbin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PO860_11545 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbin03400
]
PO860_11545 (uvrB)
DNA repair and recombination proteins [BR:
rbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PO860_11545 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PO860_11545 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA_16
SWI2_SNF2
Microtub_bd
UB2H
Motif
Other DBs
NCBI-ProteinID:
WEA58356
LinkDB
All DBs
Position
2311537..2314488
Genome browser
AA seq
983 aa
AA seq
DB search
MAKSPKKSPAPNGFEEAPQSSFEGAPLSGSVADWVKQLEADAEASGVETQRQIASKAGKH
RKKVEIAASKSARGTSMGGSTDPKTRAAAGLNPVSGMDTTLEEASSLQAGTAVTATVEAL
SALIESGNPLHKNGKIWTPHRPARPEKSEGGIRIRMQSDYEPAGDQPTAIRDLVEGLENG
DRSQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNKTLAAQLYSEFKNFFPDNAVEYFVS
YYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDCIIVASVSCIYGIGSV
ETYTAMTFQMSVGDRLDQRQLLADLVAQQYKRRDMDFTRGSFRVRGDTIELFPAHLEDAA
WRISMFGDEIDAITEFDPLTGQKVGDLKSVKIYANSHYVTPRPTLNGAIKSIKEELRLRL
AELEKAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYSRYLTGRDPGDPPPTLFEYIPD
NALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPLRFEEWDAMRPDTIA
VSATPGAWEMDQSGGVFAEQVIRPTGLIDPPVEVRSARTQVDDVLGEIRETSAKGYRTLC
TVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEILRDLRLGAFDVLVGINLLREGLD
IPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADNVTGSMKRAMEETSRR
REKQMVYNAEHGITPESVKARISDILDSVYERDHVRADISGVSGKGFADGGNLVGNNLQT
HLNALEKSMRDAAADLDFEKAARLRDEIKRLKAVELAAMDDPMAREEAKAMEGKARGSAA
PPSSQGLTRGSKPATETQASYFSRPSLDDMGPGTDTATPLFRKPDLDDMGRDIAEPARKS
LFRKNDLDEMTVGRTEKPVIGHVPEKPDAAKGTKRFSPLLEGQPERDDVRPVVRGKTGVG
SYEDPGEQKRKGRTKGKTGRPGR
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctccgaagaaatcccccgccccgaacggcttcgaggaagccccgcaatcg
tccttcgagggcgcgccgctctccggctcggttgccgattgggtgaagcagttggaggcc
gatgcggaagcctcgggcgtcgagacgcagcgccagatcgcctccaaggccggcaagcat
cgcaagaaggtggagatcgccgcctcgaaatcggcgcgcggcacctccatgggcggctcc
accgatccgaagacgcgcgcggcggccgggctcaatcccgtctcgggcatggatacgacg
ctggaggaagcctcgtcgctgcaggcaggcaccgccgtcaccgccaccgtcgaggcgctg
tcggcgctgatcgagagcggcaatccgctgcacaagaacggcaagatctggacaccgcac
cgccctgcccggccggaaaaatccgaaggcggcatccgtatccgcatgcagtcggattac
gagccggccggcgaccagcccaccgccatccgcgacctcgtcgagggcctggagaacggc
gaccgcagccaggtgctgctcggtgtcaccggctccggcaagaccttcaccatggccaag
gtgatcgaggcgacgcagcgcccggccgtgatcctggcgccgaacaagacgctggccgcg
cagctctattccgaattcaagaacttcttccccgacaatgcggtggagtatttcgtttcc
tactatgattattaccagccggaagcctatgtgccgcgctccgacacctatatcgagaag
gaatcctcgatcaacgagcagatcgaccgcatgcgccactcggcgacgcgctcgctgctc
gaacgcgacgactgcatcatcgtcgcctcggtttcctgcatctacggtatcggctcggtc
gagacctatacggcgatgaccttccagatgtcggtcggcgaccggctcgaccagcgccag
ctgctggccgacctcgtcgcccagcaatacaagcgccgcgacatggatttcacccgtggc
agcttccgggtgcgcggcgacacgatcgagctcttccctgcccacttggaagatgccgcc
tggcgtatctcgatgttcggcgacgagatcgacgccatcaccgagttcgacccactcacc
ggccagaaggtcggcgacctgaaatcggtgaagatctacgccaattcgcactatgtcacc
ccgcgcccgacgctgaacggcgccatcaagtcgatcaaggaggagctcaggctgcgcctc
gccgagctggagaaggccggccgtctgctggaggcccagcgcctggagcagcgcacccgc
tacgatatcgaaatgctcgaagccacaggctcctgccagggcatcgagaactattcgcgc
tatctcaccggccgtgaccccggcgatcccccgccgacgctgttcgaatatatccccgac
aacgccctcgtcttcatcgacgaaagccatgtcaccgtgccgcagatcggcggcatgtac
cggggcgacttcaggcgcaaggcgacgctggccgaatacggcttccgcctgccctcctgc
atggacaaccggccgctgcgcttcgaggaatgggacgccatgcgccccgacaccatcgcc
gtttcggccacccccggcgcctgggagatggaccagtccggcggcgtcttcgccgaacag
gtgatccgcccgaccggcctgatcgacccgccggtcgaggtccgatcggcccgcactcag
gtggacgacgtgctcggcgagatccgcgagacatcggccaagggctaccgcaccctctgc
accgtgctgaccaagcgcatggccgaggacctgaccgaatatctgcatgagcagggcgtg
cgcgtccgctacatgcactccgacatcgacacgctggagcgtatcgagatcctccgcgat
ctccgcctcggcgccttcgacgtgctcgtcggcatcaaccttttgcgtgaaggcctcgac
attcccgaatgcggcttcgtcgccatcctcgacgccgacaaggaaggcttcctgcgctcc
gagacctcgctgatccagacgatcggccgcgccgcacgcaacgtcgacggcaaggtcatc
ctctatgccgacaatgtcaccggctcgatgaagcgggcgatggaggaaaccagccgccgc
cgcgaaaagcagatggtctacaacgccgaacacggcatcaccccggaatcggtcaaggcc
aggatctccgacattctcgacagcgtctacgaacgcgaccacgtccgcgccgatatttcg
ggcgtctcgggcaagggcttcgccgatggcggcaacctcgtcggcaacaacctgcagacc
catctcaacgcgctcgaaaaaagcatgcgcgacgccgccgccgacctcgacttcgaaaaa
gccgcccgcctccgcgacgaaatcaaacgcctcaaggccgtggaactcgccgccatggac
gacccgatggcgcgcgaggaagcgaaggcgatggaaggaaaagcgcgcggctccgccgct
cctccgtcatcccagggcttgacccgaggatccaagccggcaaccgagacgcaagcctcc
tacttctccagacccagcctcgacgacatgggcccaggcaccgacaccgccacccctctc
ttccgcaaaccggatctggacgacatgggccgcgacatcgccgaacccgccagaaagagc
ctcttccgcaaaaacgacctcgacgaaatgaccgtcgggcggacggaaaagccggtcatc
ggccacgtgccggaaaagccggatgccgccaagggcaccaagcggttttcaccattgctt
gaagggcagccggaacgcgatgacgtgcggccggtcgtgcgtgggaagacgggtgtcggg
agctatgaggacccgggtgagcagaagcgcaaggggcggacgaaggggaagactgggcgg
ccgggccggtga
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