Rhizobium binxianense: PO860_14100
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Entry
PO860_14100 CDS
T11088
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rbin Rhizobium binxianense
Pathway
rbin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PO860_14100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbin03400
]
PO860_14100
Enzymes [BR:
rbin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PO860_14100
DNA repair and recombination proteins [BR:
rbin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PO860_14100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WEA58830
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Position
complement(2839821..2841275)
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AA seq
484 aa
AA seq
DB search
MRRVVLAGRGDLAEWRDAARAFAVAGILPEEIDWREKDAEADLSFQRDAMPPPPAATRKP
MTVPPAFIELAETVLCHSDPARFSLLYRLLWRLQLDRQVLEVASDEDVARARLMEKNVRR
DVHKMTAFVRFKEVGPVSADRRKFLAWFEPDHHIVGRTAPFFQRRFTDMDWLIATPKGSA
AWDGERLTINDAPCEKPNLTDATDELWRTYYASIFNPARLKVKAMQAEMPKKYWKNLPEA
DLIPGLIASAESKVRAMAAREATQSLPFHDRLQEAARNLPAEPEAPAGTLEALRAEAAVC
TRCPLHANATQTVFGEGPRDAEVMFVGEQPGDQEDISGRPFVGPAGRLLDQVISEAGIDR
SRLYVTNAVKHFKYEPRGKRRIHQKPDMGEVTHCRWWLNLEMTLVKPKLVVAMGATALAA
LTDVKQPLQNIRGQAMAIDAGRKLFVTVHPSYLLRIPDERLKAEELARFRDDMLKIQRLM
AIAG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgggtcgtgctggcaggacgcggggatcttgccgaatggcgggatgccgctcgc
gctttcgcggtcgccggcatcttgccggaagagatcgattggcgcgaaaaagacgcagag
gcggatctttcattccaacgcgacgccatgccgccaccgcccgcggcgacacgcaagccg
atgacggtgccgccggccttcatcgagctggcggagaccgttctctgccattccgatccg
gcgcggttttccctgctttaccgcctgctctggcgactgcagctggaccggcaagtgctc
gaagtggcatccgacgaggatgtcgcccgtgctcggctgatggagaaaaacgtccgacgc
gatgtgcataagatgacggccttcgtccgtttcaaggaggtggggcccgtctctgcggac
cgccgaaaattcctcgcctggttcgagccggaccaccatatcgtcgggcgcacagcgcca
ttcttccaacggcgcttcaccgacatggactggctgatcgccacgcccaaagggtcggcc
gcctgggatggtgaacggctgacgataaacgacgcgccgtgcgaaaagcccaacctcacc
gatgccaccgatgaactgtggcgcacctactacgccagtatcttcaatccggcgcggttg
aaagtgaaggcgatgcaggcggagatgccgaaaaaatattggaagaacctgccggaggcc
gatctcattcccgggctgatcgcatcggcagagagcaaggtgcgggccatggccgcgcgg
gaggcgacgcaatcgctgccttttcacgaccggttgcaggaggcggcgcgcaaccttccc
gccgagcctgaagcacccgcaggcacgctggaagcgttgcgggccgaagccgcggtttgt
acacgttgtccacttcatgccaatgcgacgcagacggtgttcggggaggggccgcgcgat
gccgaggtgatgttcgtcggcgagcagccgggcgatcaggaggacatatcaggacgcccc
ttcgtcggtccggccggccggttgctcgaccaggtgatatcagaggcgggcatcgaccgc
tcgaggctctatgtcaccaatgccgtcaagcatttcaaatatgagccgcgcggcaagcgc
cgcatccatcagaagcctgacatgggtgaggtgacgcattgccgctggtggctcaatctg
gagatgacgctggtcaagccgaagctcgtggttgccatgggggcgacggcgctggcggcg
ctgaccgacgtcaaacagcctctccagaatatcagagggcaggcaatggcgatcgacgcg
gggcggaagctgttcgtgacggtccatccgtcctatctgctgcgtattcctgacgaacga
ttgaaggcggaggagttggcgcgatttcgcgacgatatgctgaaaatccagcggcttatg
gcaatagctggataa
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