Rhizobium binxianense: PO860_15455
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Entry
PO860_15455 CDS
T11088
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rbin Rhizobium binxianense
Pathway
rbin03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rbin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PO860_15455 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbin03400
]
PO860_15455 (ung)
Enzymes [BR:
rbin01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PO860_15455 (ung)
DNA repair and recombination proteins [BR:
rbin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PO860_15455 (ung)
Prokaryotic type
PO860_15455 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WEA59067
LinkDB
All DBs
Position
complement(3123102..3123803)
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AA seq
233 aa
AA seq
DB search
MSDTSVSLEESWKTALAGEFSSPYMQQLKAFLVAQKQVGKRIFPRGSEYFRALDLTPISS
VKVVILGQDPYHGLGQAHGLCFSVRPGVRIPPSLVNIYKEMETDLGIAPALHGFLEHWAR
QGVLLLNSVLTVEEGQAAAHQGKGWEKFTDAVIRKVNDECESVVFMLWGSYAQRKAAFVD
TTRHLVLKAPHPSPLSAHNGFFGCAHFSKANAFLQSRGRAPIDWQLPANPDDA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacatcagtcagtctcgaagagagctggaagaccgccttggcgggggagttc
tcaagcccctatatgcagcaacttaaagcctttcttgtcgcgcagaagcaggtcggcaag
cggattttcccccggggtagtgaatatttccgcgccctagacctcaccccgatctccagc
gtcaaggtcgtcattctcggccaggacccctatcacgggctggggcaagcccacgggctg
tgcttcagcgtgcggccgggcgtgcgcataccgccctcgctcgtcaatatctataaggag
atggagacggatctcggcatcgcgccggcgctccatggttttctcgaacattgggcaagg
caaggcgtgctgctgctaaacagcgtgctgaccgtcgaagaagggcaggcggcggcccat
cagggcaaggggtgggagaaattcaccgacgccgtcatccgcaaggtcaacgacgagtgc
gaatccgtcgtcttcatgctctggggctcctacgcccagcgcaaggccgccttcgtcgat
acgacacggcatttggtgctgaaggcgccgcacccctcgccgctttcggcccataacggg
tttttcggctgcgcgcatttttctaaggcgaatgccttcctgcagtcacgtggacgcgcg
ccgatcgactggcaattgccggctaatcccgatgatgcttaa
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