Rhizobium binxianense: PO860_17085
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Entry
PO860_17085 CDS
T11088
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
rbin Rhizobium binxianense
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
HTH_7
AAA
AAA_2
HTH_22
Mg_chelatase
HTH_23
MCM
Phage_AlpA
RWP-RK
HTH_29
HTH_28
F_bP_aldolase
HTH_Tnp_1_2
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
WEA59363
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Position
complement(3459242..3460786)
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AA seq
514 aa
AA seq
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MTGYNELKGAGQILVVEDDPVQRRLLKNAIERHGHVVHQAENGRIGLEMVKRDSGLFNVI
VLDLMMPEMTGLEFLDALHEFGTQIPVIVQTGQGGIETVVQAMRAGAFDFVVKPVSPERI
ATSISNAMKLDQREVKARAGRRSRSGAVGFDDIVSASPAMIRVIDLAQRAAQSNIPVVLE
GESGVGKELVARAIQSGGDRSNKPFVTVNCGAIPHNLVESILFGHEKGAFTGATERHIGK
FMEADGGTIFLDEIGDLPLEVQVKLLRAVQQGEIETVGARTAHKVNVRLISATNKDLIEE
VKNGHFREDLYYRLNVFPITIPALRKRKEDIPHLVRVFADRFSSEQKSGRRMTVNAGALA
LLTAYDWPGNIRQLENAIFRAVVLAEGAELTEGDFPQIAAQLPEYEVVDHLALVADNTGL
DPDDNYGDDFRASIAGEVHHRLSETSENAIASVNPAGDVRRLADVEEELIRFALKFYRGQ
MSQVARKLGIGRSTLYRKLKDYGIDPDNPQKDAA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaccggttacaatgagctcaagggagcagggcaaatcctcgtggtcgaggacgacccg
gtgcagcgccgtctgctcaagaacgcaatcgagcgccacggccatgtcgtgcaccaggcg
gaaaacggccgcatcggcctggaaatggtcaaacgcgacagcggccttttcaacgtcatc
gtgctcgacctgatgatgccggagatgaccggcctcgaatttctcgacgcgctgcacgaa
ttcggcacgcagatcccggtcatcgtccagacggggcagggcggcattgaaacggtggtg
caggcgatgcgcgccggcgccttcgatttcgtcgtcaagccggtctcgcccgaacgcatc
gccacctcgatctcgaacgcgatgaagctcgaccagcgcgaggtcaaggcgcgggccgga
cgccgatctcgctcaggcgcggtcggtttcgacgacatcgtctcggcaagcccggcgatg
atccgcgtcatcgatctggcgcagcgggcggcccagtccaacattcccgtcgtgctcgaa
ggcgaatccggcgtcggcaaggagctggtggcgcgtgccatccagtccggcggcgaccgc
tcgaacaagccgttcgtcaccgtcaattgcggggcgatcccgcataatcttgtcgagagc
atcctcttcggtcacgagaagggcgcgtttaccggcgcgaccgagcgccatatcggcaaa
ttcatggaagccgacggcggcacaatcttcctcgacgagatcggcgacctgccgctcgag
gtgcaggtgaagctgttgcgcgccgtgcagcaaggcgagatcgagaccgtcggcgcgcgc
accgcgcacaaggtcaatgtccggctgatctcggcgaccaacaaggatctgatcgaggag
gtcaagaacggccatttccgcgaggatctctactatcgcctcaacgtcttcccgatcacc
attcctgcacttcgcaagcgtaaggaggacattccgcatctggtgcgcgtctttgcagac
cgcttctccagcgagcagaagagtggtcggcgcatgacggtgaacgcaggcgcgttggcg
ctgctgaccgcctatgactggccgggcaatatccgccagctcgaaaacgcaatcttccgt
gcggttgttctggccgaaggggcggaactgaccgagggcgacttcccgcagatcgccgcc
cagcttccggaatacgaagtcgtggatcacttggcgctcgttgccgacaataccggcctc
gatcccgatgacaattatggtgacgacttcagggcatcgatcgcaggagaagtacaccac
cgcctgtcggaaacctcggaaaacgcgatcgccagcgtcaatcctgccggcgacgtgcgt
aggcttgccgatgtcgaggaggagctcatccgattcgcactcaaattctatcgcggacag
atgagtcaagtggcgcgcaaacttggcattggtcggtccacactttatcgcaagctcaag
gactacggtatagaccccgacaatccccagaaagatgcggcttaa
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