Rhizobium binxianense: PO860_18520
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Entry
PO860_18520 CDS
T11088
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rbin Rhizobium binxianense
Pathway
rbin00300
Lysine biosynthesis
rbin00470
D-Amino acid metabolism
rbin01100
Metabolic pathways
rbin01110
Biosynthesis of secondary metabolites
rbin01120
Microbial metabolism in diverse environments
rbin01230
Biosynthesis of amino acids
Module
rbin_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rbin00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PO860_18520 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PO860_18520 (lysA)
Enzymes [BR:
rbin01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PO860_18520 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WEA59619
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Position
3781920..3783188
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AA seq
422 aa
AA seq
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MNHFEYRDGILHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPANRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAARLPGIEVTGIDMHIGSQITELQPFDDAFRLLHDLVATLRADGHTIDHVDIGGGL
GIPYKDDNNPPPLPDAYAAIVKNQLRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHAIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccacttcgaataccgcgacggcatccttcacgccgagaacgttcccgttcccgag
atcgccaaggcggtcggcacgcccttttatgtctattccaccgcaacgctggagcgccat
taccgcgtcttttcggaagccttcgccgacatggattccatggtctgttatgcgatgaag
gcaaattcgaaccaggcggtgctgaagacgctgggccgcctcggcgccggtatcgacgtc
gtctcggaaggcgagctgcgccgcgcgcttgccgccgacattccggcaaaccgcatcatg
ttttcaggggtcggcaagacgccgtccgagatggattttgcgcttgaggccggcatctac
tgcttcaacgtcgaatccgagcctgaactcgaaatcctcaatcagcgcgccgtcagcgcg
ggcaagaaagccccggtctccttccgcatcaaccctgacgtcgacgccaagacgcattcc
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcg
atctatgcccatgccgccaggctgccgggcatcgaggtcaccggcatcgacatgcatatc
ggcagccagatcaccgaattgcagccgttcgacgacgccttcaggctgctgcatgatctt
gtcgcgacgctgcgcgccgacggccacaccatcgatcacgtcgatatcggcggcggcctc
ggcatcccctacaaggacgacaacaatccgccgccactgccggatgcctatgcggcaatc
gtcaagaaccagttgcgcggcctgaactgcaagatcatcaccgagccgggccgcctgatc
gtcggcaatgccggtatcctggtgaccgaagtcctctatgtgaaggatggcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaatgatcttatccgccccaccctctacgaggcc
tatcacgagatccgcccggtgacgatttcggcggcgaacgccccacgcatccgcgccgac
gtcgtcggtcccgtctgcgagaccggcgattatctggcgctcgaccgcgagatggcgatg
ccgaagcccggagacctgatggccgtcagcacggccggcgcctatggtgcggtccaggcc
ggcacctataacagccgcctgctcgtgcccgaagttctggtcaagggcagcgatttccat
gcgattcgcccgcgcagaacctatgccgagctgatcagcctcgactccgttccggcctgg
ctggactga
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