Rhodopseudomonas boonkerdii: E0H22_00015
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Entry
E0H22_00015 CDS
T07799
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E0H22_00015 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbk03400
]
E0H22_00015 (recF)
DNA repair and recombination proteins [BR:
rbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
E0H22_00015 (recF)
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Ortholog
Paralog
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Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
AAA_29
AAA_27
ABC_tran
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UGV24207
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All DBs
Position
2962..4098
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AA seq
378 aa
AA seq
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MTASRIHRLSLANFRSYRAASLETSADMVALVGPNGAGKTNCIEAISFLSPGRGLRRATL
EDVANKDGDGSWAVSATVEGEVGLATLGTGIDPPIEGVSNSRRCRIDREPVGSAAAFGDH
LRMVWLTPAMDQLFMGAASERRRFFDRLVLAIDKDHSSRVSALERSLRSRNRLLEERSND
GHWLDAVERETAELAVAVAAMRSETVTRLAAMLHARGEASAFPSAIVSLDGWMEQALRSE
PATAVEDRYRAVLRDNRPRDAAAGRTLDGPHLTDLQVIYAPKNMPARDASTGEQKALLIG
LILAHATLVAEMTGITPLLLLDEIVAHLDPDRRKSLFGELATLGAQVWMTGADPAAFIDI
GPMGELFDVVQGRIARRG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctcccgtatccatcgcctctccctcgccaatttccgctcctatcgcgcggcg
tcgctggagacgtcggcggacatggtggcgctggtcggccccaatggcgccggcaagacc
aattgcatcgaggcgatctcgtttctttcacccggccgcggactgcgacgcgccacactg
gaagatgtcgccaacaaggacggtgacggctcgtgggccgtttcggcgacggttgagggc
gaagtgggcctcgcgacccttggaacgggcatcgatcccccgatcgaaggcgtatcaaac
tcccggcgctgccggatcgaccgtgagccggtgggctcagcggccgcgttcggcgaccac
ctgcgcatggtgtggctgacaccggcaatggaccagttgttcatgggcgccgcctcggaa
cggcggcgcttcttcgaccggctggtactggccatcgacaaggatcacagcagccgcgtc
tccgcactggaacgcagcctgcgttcgcgcaatcgcctgctcgaggagcgcagcaacgac
ggacattggctcgacgcggtcgagcgcgagacggcagaactcgcagtggctgtagcggcg
atgcgcagcgagacggtaacgcggcttgccgcaatgctgcatgctcgcggggaagcgtcc
gccttcccgtcggcaatcgtttcactcgacggatggatggagcaggcgcttcgcagcgag
ccggcaacagcggtagaagatcgctaccgcgccgttctgcgcgataaccgcccgcgcgat
gccgccgccggccgcacactggacggtccgcatctcaccgacctgcaggtaatctacgca
ccgaaaaacatgccggcacgcgatgcctccaccggcgaacagaaagctctgctgatcggc
ctgatcctcgcccatgccactctggtggcggagatgaccggcatcacgccgctgctgctg
ctggacgaaatcgtggcgcatctggaccccgaccgtcgcaagtcgctgttcggcgagctc
gcgacccttggtgcgcaggtctggatgaccggcgccgaccccgcggccttcatcgatatc
gggccgatgggcgaactgttcgatgtcgtgcagggacgcatcgcacgacgcggttga
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