Rhodopseudomonas boonkerdii: E0H22_03025
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Entry
E0H22_03025 CDS
T07799
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk00071
Fatty acid degradation
rbk00280
Valine, leucine and isoleucine degradation
rbk00310
Lysine degradation
rbk00362
Benzoate degradation
rbk00380
Tryptophan metabolism
rbk00410
beta-Alanine metabolism
rbk00640
Propanoate metabolism
rbk00650
Butanoate metabolism
rbk00907
Pinene, camphor and geraniol degradation
rbk00930
Caprolactam degradation
rbk01100
Metabolic pathways
rbk01110
Biosynthesis of secondary metabolites
rbk01120
Microbial metabolism in diverse environments
rbk01200
Carbon metabolism
rbk01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
E0H22_03025
00650 Butanoate metabolism
E0H22_03025
09103 Lipid metabolism
00071 Fatty acid degradation
E0H22_03025
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
E0H22_03025
00310 Lysine degradation
E0H22_03025
00380 Tryptophan metabolism
E0H22_03025
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
E0H22_03025
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
E0H22_03025
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
E0H22_03025
00930 Caprolactam degradation
E0H22_03025
Enzymes [BR:
rbk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
E0H22_03025
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
E0H22_03025
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
E0H22_03025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
UDPG_MGDP_dh_N
FAD_binding_3
GIDA
F420_oxidored
ApbA
NAD_Gly3P_dh_N
NAD_binding_8
Pyr_redox_2
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
UGV24746
LinkDB
All DBs
Position
complement(651797..654010)
Genome browser
AA seq
737 aa
AA seq
DB search
MTFKNFKVETDADGIALVTWDIPGRSMNVLDTTTIEELGAIVDQTTADASVKGVVVTSGK
DAFSAGADLSMLEGMNKIFAETKKAKGEEAAQQMLFHESRKLSLTLRKIETAGKPWVAAI
NGLALGGAFELTLACHYRVAAENPKTKLGLPEIKVGLFPGGGGTQRLARMLQPQDTMQML
LKGDQVNLAKAKAMNIVGAVVPAADLIKTSKEWIKAGGKPVAPWDEKGFKLPGGPVYSKQ
GMMMFPAGNAIYRRETFDNYPAARAIMQCVYEGLQLPMDAALRVESRYFAHILQTKEAAA
MIRSLFLSMQELNKGARRPQNVPPTKVKKLAIIGAGFMGASVGYVSAKGGIEVVLIDRDQ
ASADKGRTHCQSVIDGLIAKGRAKEADRDALMSRITATADFEVIRECDLVIEAVFEDRSV
KAEIYKKVQPLLKEGAIIASNTSTLPINSLAEEFTDQSKFIGIHFFSPVEKMMLVEIIVG
KNTGDVALATALDYVRVIGKTPIVVNDSRGFFANRCVLRFTAEGLEMLLEGVPPAMIENT
AKMAGMPVGPLSLSDEIALDLVLKIMKATEADLGSQAVDQAQKKLIVEMVEKQERFGRKN
GKGFYEYPPKGKGSKALWKGIAPLLPKALDPDTLDVEELKQRFLVVQAVEAARTVEDNVI
VDPREADVGSILGFGFAPFTGGTLSYIDFMGTKKFVELCHKLEKKYGSRFTPPKLLEEMA
AKGETFYGRFAPKKAAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaagaatttcaaggttgagaccgacgccgacggcatcgccctcgtcacctgg
gacattccgggccgttcgatgaacgtgctcgacaccacgacgatcgaagaactcggcgcc
atcgtcgatcagaccacggcggatgcctccgtgaagggcgtcgtcgtcacctccggcaag
gacgcattctcggccggcgccgatctctccatgctggaaggcatgaacaagatttttgcc
gagacgaagaaggcaaagggcgaggaagccgcccagcagatgctgttccacgagagccgc
aagctctcgctcacgctgcgcaagatcgagaccgccggcaagccgtgggtcgcggccatc
aacggtctcgccctcggcggtgcgttcgagctcaccctcgcctgccattatcgcgtagct
gcggagaacccgaagacgaagctcggcctgcccgagatcaaggtcggcctgttccccggc
ggcggaggcacccagcgcctcgcgcgcatgctgcagccgcaggacacgatgcagatgctg
ctgaaaggcgatcaggtcaatctcgccaaggccaaggcgatgaacatcgtcggtgccgtg
gtgccagctgctgatctgatcaagacctcgaaggaatggatcaaggccggcggcaagccc
gtcgcgccgtgggacgagaagggcttcaagctgcctggcggccccgtctattccaagcag
ggcatgatgatgttcccggccggcaacgccatctatcgccgcgagaccttcgacaactat
ccggccgcccgcgcgatcatgcagtgtgtctatgaaggcctgcagctgccgatggacgcc
gcgctgcgcgtggagtcgcgctatttcgcccatatcctgcagacgaaggaagcggcggcg
atgatccgcagcctgttcctctccatgcaggagctcaacaaaggcgcacgccgtccgcag
aacgtgccgccgaccaaggtcaagaaactcgccatcatcggcgccggcttcatgggcgcg
tcggtcggctatgtctcagccaagggtggcatcgaggtggtgctgatcgatcgtgatcaa
gcctcggccgataagggccgcacgcattgccagtctgtcatcgacgggctgatcgccaag
ggccgcgccaaggaagccgatcgcgacgcgctgatgtcgcgcatcaccgcgacggccgat
ttcgaagtgatccgcgaatgcgacctggtcatcgaagcggtgttcgaggatcgctccgtc
aaggccgagatctacaagaaggtgcaaccgctgctgaaggaaggcgcgatcatcgcctcc
aacacctcgaccctgccgatcaactcgctggccgaggaattcaccgaccagtcgaaattc
atcggcatccacttcttctcgccggtcgagaagatgatgctggtagagatcatcgtcggc
aagaacaccggcgatgtcgcgctcgccaccgcgctcgattatgtccgcgtcatcggcaag
accccgatcgtcgtgaatgatagccgcggcttcttcgccaatcgctgcgtgctgcgtttc
acggccgaaggcctcgaaatgctgctcgaaggtgtgccgccggcgatgatcgaaaacacc
gccaaaatggccggcatgccggtcggtccgctgtcgctgtcggacgagatcgcgctcgac
ttggtgctgaagatcatgaaggccaccgaagccgatctcggctcgcaggcggtcgatcaa
gcgcagaagaagctgatcgtcgagatggtggaaaagcaggagcgttttggccgcaagaac
ggcaagggcttttacgagtatccgccgaagggcaagggctcgaaagcgctatggaaaggg
atcgcaccgttgctgccgaaggcgctcgatcccgacacgctcgatgtcgaggagctgaag
cagcgtttcctggtggtgcaggcggtggaagccgcccgcacggtcgaggacaatgtgatc
gtcgacccgcgcgaggccgacgtgggctccatcctcggcttcggcttcgcaccgttcacc
ggcggcacgctgagctatatcgacttcatgggcaccaagaaattcgtcgagctctgccac
aagctggagaagaagtacggctcgcggttcacgccgcccaaactgctggaggaaatggcg
gcgaagggcgagacgttctacggacggttcgcgccgaagaaggcagccgcctga
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