KEGG   Rhodopseudomonas boonkerdii: E0H22_03685
Entry
E0H22_03685       CDS       T07799                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rbk  Rhodopseudomonas boonkerdii
Brite
KEGG Orthology (KO) [BR:rbk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rbk03400]
    E0H22_03685
Enzymes [BR:rbk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E0H22_03685
    5.6.2.6  RNA 3'-5' helicase
     E0H22_03685
DNA repair and recombination proteins [BR:rbk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    E0H22_03685
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: UGV24857
LinkDB
Position
786679..788934
AA seq 751 aa
MTSPVSASGPEGAYERLHPKVRRWIRDQGWEELREVQAQAIGAVLGSDGDVLIAASTAAG
KTEAAFLPVLTAVAERTAPGFSVLYVSPLKALINDQFRRLGELCESMEISVVKWHGDASQ
ADKKRARAKPAGVALITPESIEAMFVRRPGDVGRLLADADFIVIDELHSFLQGPRGLHVA
SLLRRIDALSKRPARRIGLSATIGDLEQARAWLRPSDPERVHVLHPPSDAPELQLQIRGY
VEPPEVVDPDHAEGAEQALADAEAEVGPKRIALDLICDHIFEHLRGANNLAFGGSRRTVE
SAADRLRRRSEKRNVPNEFFPHHGSLSKVLREELEERLKDGKLPTTAVCTSTLELGVDIG
SVKSVAQIGSPRSLASLRQRLGRTGRRRGTPAVLRIYVREPDIERKSGILDRLRPNTVRS
VAVVRLLLKGFVEEAGASPETASTLIHQLLSVITERGGIKAKPLFDLLCGPGPFARIGSA
EFAMLLRHLGSEDVGFLEQAPDGTLMLARNGENIVRSRNFFAVFESADEWRLTVGGRTLG
TLPITHPVHKEGLVVFAGRRWIVQDIDEQRMTLHVASHPGGVVPRFESSASEPAHDRLIA
EMRKVYLSTDVPPYLDAGGRKLLADGRKTFRDLDLGRQFVVEEDRDIHVFLWKGSAATAT
FSAALAMRGVRAQMHDLGVTTSEVELDELRAALQKMSQARLDPGEIAGFVANIKGGKFKE
QVPDRLARDLWASNNIALVAVVAPMAATLLG
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgacctcaccagtctccgcatcggggcctgagggcgcctacgagcggcttcatcccaag
gtccgccgatggattagggaccaggggtgggaggagctgcgtgaagtgcaggcgcaagcc
atcggcgccgtgctcggcagcgacggggatgtcctcatcgcggcatcgacggcagcggga
aaaacggaagcggcgtttctgcccgttctgacagccgttgcagagcgcaccgcgccgggt
ttctcagtgctctatgtcagccctctgaaggcacttatcaacgaccagttccgacggctc
ggagagctgtgcgaaagcatggagatttcggtcgtcaaatggcatggcgatgcgtcgcag
gcggataagaagcgggcgcgcgcgaagccggccggagtggcgctcatcacgcccgagtcg
atcgaggcgatgttcgtcaggcgtcccggcgacgttggccggcttctggccgacgccgac
ttcatcgtgatagacgaactccattcgtttcttcagggaccgcgcggactccacgtcgca
agtctgctgcggcgcatagatgcgctctcgaaacggccggcgcggcgcatcggtctgtca
gccacgatcggagatctcgagcaggcgcgggcgtggctgcggccttccgatcccgagcgc
gtccatgttctgcacccgccatctgacgcgcccgagctgcagttgcagatacgtggctat
gtcgagcccccggaagtggttgatcccgatcacgccgaaggcgcagaacaggctttggcc
gacgcggaggcggaggtcggaccgaagcgcatcgcgctcgacctcatttgcgaccatatc
ttcgaacaccttcggggcgcgaacaatctcgccttcggtggatcgcgcaggacggtcgag
tccgccgccgaccggctgaggcggcggtcggagaagcgcaacgtcccgaacgagttcttt
ccccaccacgggagcctgtcgaaagtactccgggaagaattggaggagaggctgaaggac
ggcaaattaccgaccacggcggtgtgcacgtccacgctcgaactgggcgtcgatataggc
tccgtcaaatcggtcgcgcagatcgggtctccgcgatctctcgcctcgttgcgacagcgg
cttgggcggaccgggcgtcggcgcggaacgcccgcggtgctgcgcatctacgtgcgcgag
cccgacatcgaacgaaagtcgggcattctggaccgcctgcgccccaacaccgtcagatcc
gtagctgtcgtgcggcttctgctgaaaggcttcgtcgaagaagcgggagcctcgccggaa
acggcgtccaccctgatccatcaattgctttcggtgatcaccgagcgcggcggcatcaag
gcaaagccgttgttcgaccttctctgcggcccgggcccgttcgcccgcatcggctccgcg
gagttcgcgatgcttctgcgtcatctcggttctgaagatgtggggtttctcgagcaggcg
cccgatggcacgcttatgctcgcccgcaacggggagaacatcgtgcggtcgcgcaatttc
ttcgctgtcttcgagtcggccgacgagtggcgtctgaccgtcggtggacgcacgctcgga
acgctccccattactcatcccgttcataaggaggggctagtcgtcttcgccggtcgccgc
tggatagtccaggacatcgacgagcagcggatgaccctccacgtcgcgtcgcacccggga
ggcgttgtcccgcggttcgaatcgtctgcgagcgagcctgcgcacgacaggctgatcgct
gaaatgaggaaagtgtacctctcgaccgacgtgccaccatatctggacgctggcgggcgc
aagctgcttgcggacggacgaaagacgtttcgcgatctggatctcggcaggcagtttgtt
gtcgaggaagaccgcgatattcacgtctttctatggaaggggtcggcggcaaccgcgacg
ttcagtgcagctctcgcgatgcgcggcgtcagggctcaaatgcatgatcttggagtgacg
actagcgaggtcgaattggacgaactgcgcgcggcgcttcagaaaatgtcgcaggcccgg
ctcgatcctggcgaaatcgccggcttcgtcgccaacatcaaaggtgggaagttcaaggag
caggtgccggatcgactggcgcgtgatctgtgggcaagcaataatatcgctctagtggct
gtagtggcgccgatggccgcaaccctactcggatga

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