Rhodopseudomonas boonkerdii: E0H22_04455
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Entry
E0H22_04455 CDS
T07799
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E0H22_04455
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_04455
Transporters [BR:
rbk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
E0H22_04455
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
RsgA_GTPase
AAA_29
AAA_22
MIT_C
AAA_16
AAA_25
AAA_28
AAA_30
AAA_23
AAA_18
nSTAND_NTPase5
cobW
nSTAND3
NACHT
NB-ARC
AAA_15
Motif
Other DBs
NCBI-ProteinID:
UGV24992
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Position
960964..962115
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AA seq
383 aa
AA seq
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MAEPLALRTGKPGAETSASQARGARAGQVIGSSITVRDAVKRYDQFHAVDHIDLDIEPGE
FITLLGPSGSGKTTLLNLLAGFQNLDGGEILVDGKPVHNVPTHKRGFGMVFQSYALFPNM
TVTQNVAFPMRMAGIDRATTERRVAETLDIMRLSAHAHKSPSEMSGGQQQRVAIARAIVM
RPKVVLMDEPLSALDRRLRESIQIEIRDLHQTIGSTILFVTHDQGEALTMSDRIAVLDAG
KIVQIGRPLEIYRHPSNRFVASFVGESNLIEAEIVQKRGTTVTLKNRAGYVFDAESRDAI
DVGRVTVLVRPERVAIHNEQTASSTSVSVTSAIFLGEILRIEAQMEGGDTLMIRCTDTAR
RPLPNIGDRLHVSWGPDDCWVLT
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcctttggctctgcgcacggggaagcccggcgcggagacgtccgcatcgcag
gcgcgcggagcgcgcgccgggcaggtcatcggctcgagcatcaccgtgcgcgatgcggtg
aagcgatatgaccaattccatgcggtcgatcacatcgatctcgacatcgagccgggggaa
ttcatcacgctgctcggcccttcgggcagcggtaagaccaccttgctgaatctgctggcg
ggcttccagaatctcgatggcggcgagatcctggtcgatggcaaaccggtgcacaatgtc
cccacgcacaagcgtggtttcggcatggtgttccagagctatgcgctgtttcccaacatg
acggtgacgcagaacgtcgcctttcccatgcgcatggccggcatcgaccgcgcgaccacg
gagcggcgcgtagcggagacgctggacatcatgcggctgtcggcgcatgcgcacaagtcg
ccctcggaaatgtcgggcggccagcagcagcgtgtggcgattgcgcgcgcgatcgtaatg
cggccgaaagtggtgctgatggacgagccgctcagcgcgctcgaccgtcgcttgcgggaa
tcgatccagatcgagattcgcgatctgcatcagaccatcggcagcacgatcctgttcgtg
acccacgatcaaggcgaggcgctgaccatgagcgatcgcatcgccgtgctcgatgccggc
aagatcgtgcagatcggccggccgctcgagatctatcgccatccgtccaatcgattcgtg
gcctcgtttgtcggcgagagtaatctgatcgaagccgagatcgtgcaaaagcgtggcacc
acggtgacgctgaagaatcgcgccggctatgtgttcgatgctgagagccgcgatgccatc
gatgtcggccgcgtgaccgtgctggtgcggccggagcgtgtcgcgattcacaatgaacag
accgcgagttcgacgtcggtcagtgtgacgtcggcgatcttcctcggcgagatcctgcgc
atcgaggcgcagatggaaggcggtgatacgctgatgatccgctgcaccgatacggcgcgg
cggcctctgccaaacatcggcgaccggctgcatgtcagctggggcccggacgattgctgg
gtgctgacatga
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