Rhodopseudomonas boonkerdii: E0H22_04460
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Entry
E0H22_04460 CDS
T07799
Name
(GenBank) ABC transporter permease subunit
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E0H22_04460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rbk02000
]
E0H22_04460
Transporters [BR:
rbk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
E0H22_04460
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Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
UGV24993
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Position
962112..963905
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AA seq
597 aa
AA seq
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MTTISLHDAPQPQVRASLVLKLKNPALLLLPAVGFLTFIYMLPLIDLIRISISGPSWLTY
FERVFAVPLYWESLVRTMQISVTVAFLCLLFGYPTALLIHRTRGLTRALIATAIVLPYFI
AILIRTYAWMVLLGRNGPVNKFLVSIGVLSEPVQLLFHRGTVLLGMTAVLLPLMVLTIYS
SVSRLDPALTRAGLASGAGPLAIFWRVLLPLTLPGIGAGFLLVFVAAIGFFITPTLLGGP
GDQMFAMHITQQADSVTSEGFLQALGVVLLLITLAVVAIAGRFLGLEFIWGGRKLTETKA
SHVTSAAISAMPRQSFGIRFADTIGWPLLRLFGMLPASCGTWTVRIMGGLVVAVLILPII
VVMVISFSSASYLTFPPPGFSLRWYEQFFSDSNWMSAFWSSALIALVSAAIAVGLGTCAA
LGIVRGDVRGKSAIMLLLVSPIIVPPVVLGLSLYTLFLKFDLVGSVFGLAAAHAIGGLPI
VVVILAAALQGVDKRLEQAASVHGASSFTVLWLVTLPAIAPGLAAATFFAFLHSFDELVL
TLFLSSAQLKTLPLMLWGDINYRLNPVLAVVSTLEVLLVVGGLFLARPVLATSQKAT
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgatctcgttgcacgacgcgccgcagccacaggtgcgcgcgagcctggtcctg
aagctcaagaacccggcgttgctgctgctaccggccgtcggtttcctgaccttcatctat
atgctgccgctgatcgacctcattcgtatcagcatcagcgggccgagctggctgacatac
ttcgagcgcgtcttcgccgtgccgctatactgggaatcgctggtgcggaccatgcagatt
tcggtgacggtggcattcctgtgcctgctgttcggctatcccaccgcgctgctgattcat
cgcacccgcggcctcacccgcgcgctgatcgccacggcgatcgtgctgccctacttcatc
gcgatcctgatccgcacctatgcctggatggtgctgctcggccgcaacgggccggtgaac
aagtttctggtctccatcggcgtgctcagcgagcccgtgcagctcctgttccatcgcggc
actgtgctgcttggcatgacagcggtgctgctgccgttgatggtactcaccatctattcg
agcgtgtcgcggctcgatcccgcgctcacgcgtgccggattggcgagtggcgcgggtccg
ctcgccatcttctggcgcgtgctgctgccattgacactgcccggcatcggcgccggcttc
ctgctggtctttgtcgctgcgatcggcttcttcatcacgccgacattgcttggcggtccg
ggcgaccagatgtttgcgatgcatatcacgcagcaggctgactcggtgacctccgaaggc
tttctgcaggcgcttggcgtcgtgttactgctgatcacgctggccgttgtcgccattgcc
ggtcgtttccttggcctcgaattcatttggggcgggcgcaagctcacggaaacgaaggcc
tcccatgtcacgtctgcggctatttcggcaatgccgcgtcagagcttcggcatccgcttt
gccgacacgatcggctggccactgctgcggctgttcggcatgctcccggcgagctgcggc
acctggaccgtccgcatcatgggcggcctcgtcgtggccgtgctgattctgccgatcatc
gtggtgatggtcatctctttcagcagtgccagctatctgactttcccgccgcccggcttc
tcgctgcgctggtatgagcagttcttctccgacagcaactggatgagtgcattctggtcg
tcggcgctgatcgcgcttgtctccgctgcgatcgcagtcggtctcggcacatgtgccgcg
ctcggtatcgtccgcggcgatgtgcgcggcaaatcggcgatcatgcttttgttggtgagc
ccgatcatcgtgccgcctgttgtgctcggtctgtcgctgtacacgctgttcctgaaattc
gatctggtcggctctgtattcggtctcgccgcagcccatgccatcggcggattacccatc
gtggtggtgatcctcgcggcagctctccaaggggtggacaaacggctggaacaggcggct
tcggtgcatggcgcgtcgtcgtttacggtactgtggctggttacgttgccggcgatcgcg
ccgggccttgcggcggcgactttcttcgccttcctgcattcgtttgatgaactggtactg
acgctattcttgtcaagcgcgcaactgaagacgcttccattgatgctgtggggcgacatc
aattaccgactcaatccggtgctggctgtggtctccacgctcgaagttctgctggtcgtg
ggaggacttttcctcgcgcgtccggtgcttgcaacgtcgcaaaaggcgacctga
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