Rhodopseudomonas boonkerdii: E0H22_05315
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Entry
E0H22_05315 CDS
T07799
Name
(GenBank) winged helix-turn-helix transcriptional regulator
KO
K03719
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Organism
rbk
Rhodopseudomonas boonkerdii
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rbk03000
]
E0H22_05315
03036 Chromosome and associated proteins [BR:
rbk03036
]
E0H22_05315
Transcription factors [BR:
rbk03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
E0H22_05315
Chromosome and associated proteins [BR:
rbk03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
E0H22_05315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
HTH_IclR
MarR
HVO_A0261_N
Xre-like-HTH
HTH_Crp_2
HTH_11
MarR_2
HTH_5
HTH_20
Fe_dep_repress
Rrf2
DIP2311-like_C
HTH_DeoR
HTH_28
DUF7343
RexB
B-block_TFIIIC
HVO_A0114
HTH_31
PglZ_C
Caud_bapl16_3rd
TrmB
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
UGV25147
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All DBs
Position
1158123..1158587
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AA seq
154 aa
AA seq
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MSFELDRTDLKILRLLQGNGRLSNADLAQAVGVSPATCHRRTQALFDEGYIKSVRAMIAP
SKVRKGALVMVGVVLDRSTPESFATFEKAVAKLKFILDCHLVAGDFDYFLKIRVGDMADF
NRIHGDQLIALPGVRQTRTFFVMKEVVDNAPLEL
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttgagctcgaccgaaccgatctcaaaatcctgcgcctgctgcagggcaatggc
cggctatcaaatgcggatctggcgcaggcggtgggcgttagcccggcgacctgccaccgg
cggacgcaggcgctgttcgacgaaggctacatcaagtccgtccgggcgatgatcgccccc
agtaaggtccgcaagggcgcgctggtcatggtcggcgtggttctcgaccgctcgacgccg
gaaagtttcgcgacctttgaaaaagccgttgcgaaactgaagttcattctcgattgccat
ctggttgccggcgacttcgactacttcctgaagatcagggtcggcgacatggcagacttc
aaccggatccacggcgaccagttgatcgcgctgcccggggtgcggcagacgcggactttc
ttcgtcatgaaggaggtcgtcgacaacgctccgctggaattgtga
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