Rhodopseudomonas boonkerdii: E0H22_08830
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Entry
E0H22_08830 CDS
T07799
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk03420
Nucleotide excision repair
rbk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
E0H22_08830
03430 Mismatch repair
E0H22_08830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rbk03400
]
E0H22_08830
Enzymes [BR:
rbk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E0H22_08830
DNA repair and recombination proteins [BR:
rbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
E0H22_08830
MMR (mismatch excision repair)
Other MMR factors
E0H22_08830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DUF3553
Motif
Other DBs
NCBI-ProteinID:
UGV25779
LinkDB
All DBs
Position
complement(1906279..1908819)
Genome browser
AA seq
846 aa
AA seq
DB search
MTDARKVPTNDLPAYQPAAGGIAARARAAAAPAPTYLSNLNPEQREAVETLDGPVLVLAG
AGTGKTKVLTSRIAHILSTGRARPGEILSVTFTNKAAREMKHRLGIMLGQAVEGMPWLGT
FHSIGGRILRSHAELVQLKSNFTVLDTDDQIRLLKQLLSAENIDDKRWPARMLAGLIDGW
KNRGLTPAQVPSGEAAVFGNGKGGKLYKDYQERLKILNAADFGDLLLECIRLFREQPDVL
KSYQARFKYILVDEYQDTNVAQYLWLRLLSQNSGGVVTSPRVRGEVGLQSNPVEGDSPPA
ALAEAAPHPDPLPASGEREQRNICCVGDDDQSIYGWRGAEVDNILRFEHDFPGAKVIRLE
RNYRSTGHILAAASHLIAHNEGRLGKTLRTEDEDGEKVTVTGAWDSEEEARGIGEEIEQL
QREGHKLNDIAILVRASFQMREFEDRFVTLGLPYRVIGGPRFYERAEIRDALAYLRVINS
PADDLAFERIVNVPKRGLGDATVQMLHDHARRRRIPLSEAARQVIETDEMKPKARGSLRD
LMTSFERWRKQSEVVPHTELAEVVLDESGYTEMWQKDRSADAAGRLENLKELVRSMEEFE
NLQGFLEHISLVMDREGAADEDAVSVMTLHSAKGLEFDNVFLPGWEEGLFPHQRALDEQG
RAGLEEERRLAHVGITRARKRAKLYFATNRRIHGTWSTTIPSRFLDELPAANVEITESKG
GSGWGGAGGYGSSRFDNLEAFGSSYSTPGWQRAQQQRGRSGGGGFNESQSPFSSFGSSAS
RKRPMVIEGELVAKSTGIESDFSLDDRVFHQKFGYGRVTKIDGNKLTIAFDKAGEKKVVD
SFVERA
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcccgcaaagtgcctaccaacgacctccccgcctatcagcccgcggcgggc
ggcattgctgcgcgcgcccgtgccgctgctgcgccggcaccgacctatctgagcaatctc
aatcccgaacagcgcgaagccgtcgagacgctggatgggcccgtgctggtgctcgccggc
gccggcaccggcaagaccaaggtgctgacctcgcgcatcgcgcatatcctttccaccggc
cgcgcccggccgggcgagatcctgtcggtgaccttcaccaacaaggccgcgcgcgagatg
aagcaccgcctcggcatcatgctcggccaggcggtggaaggcatgccgtggctcggcacc
ttccactccatcggcggtcgcatcctgcgcagccatgccgagctggtgcagctcaagtcg
aatttcacggtgctcgacaccgacgaccagatccgcctgctcaagcagctcctgtccgcg
gaaaatatcgacgacaagcgctggcccgcgcgcatgctggccggcctgatcgacggctgg
aagaatcgcggcctgacgccggcgcaggtgccgtcaggtgaggccgcggtgttcggcaac
ggcaagggcggcaagctctacaaggactatcaggagcgactgaagatcctgaacgccgcc
gacttcggcgatctcctgctggaatgcatccgcctgttccgcgaacagccggatgtgctg
aagtcgtatcaggcgcggttcaaatatatccttgtcgacgagtatcaggatacgaacgtc
gcgcagtatctttggctgcgactgctgtcacagaactcaggcggagtagtcacctctccc
cgcgtgcggggagaggtcggattgcaaagcaatccggttgagggggactctccacctgct
gcgctcgcggaggcagcccctcaccccgaccctctccccgcaagcggggagagggagcaa
cgcaacatctgctgcgtcggcgatgacgatcagtcgatctatggctggcgcggcgccgaa
gtggacaacatcctgcgcttcgaacatgattttcccggcgccaaggtgatccggctggag
cgcaattatcgctccacgggccacatcctcgccgccgcctcgcatctgatcgcgcataac
gagggccggctcggcaagacgctgcgcaccgaggacgaggacggcgagaaagtcaccgtg
accggcgcatgggattccgaagaggaagcccgcggcatcggcgaggagatcgagcagctg
cagcgcgagggccacaagctcaacgacatcgccatcctcgtccgcgcctcgttccagatg
cgcgaattcgaagatcgtttcgtcaccctcggcctgccctatcgcgtgatcggcggcccg
cgcttctatgagcgcgcggaaatccgcgatgccctcgcctatctgcgcgtgatcaattcg
ccggctgacgatctcgctttcgagcgcatcgtcaatgtgccgaagcgcgggctcggcgat
gccaccgtgcagatgctgcacgaccatgcgcgccgccgccgcattccgctctccgaagcc
gcacggcaggtgatcgagaccgacgagatgaagccgaaggcgcgcggctcgctgcgcgac
ctgatgacgagtttcgaacgctggcgcaaacagagcgaagtggtcccgcacaccgaactt
gcagaagtcgtgctcgacgagagcggctataccgagatgtggcagaaggaccgctcggcg
gacgccgccgggcggctcgagaacctgaaagaactcgtgcgttccatggaggaattcgag
aacctgcagggcttcctcgaacacatctcgctggtgatggaccgcgagggcgcggcggac
gaagacgccgtgtcggtcatgacgctgcattcggccaagggactcgaattcgacaatgtg
ttcctgcccggctgggaggaaggcctgtttccacatcagcgggccctcgacgagcagggc
cgcgcgggcctcgaggaggaacgccgcctcgcccatgtgggcatcacgcgcgcccgcaag
cgggcaaagctgtattttgccaccaatcgccgcattcacggcacctggagcacgacgatt
ccgtcacgcttcctggacgagctgccggcggcgaatgtcgagatcacggaatccaagggt
ggcagcggctggggcggcgccggcggctacggctcgtcgcgcttcgacaatctcgaagcc
ttcggatccagctattcgaccccgggctggcagcgcgcgcagcagcagcgcggccgcagc
ggcggtggcggcttcaacgagagccaatcgccgttttcgtcctttggcagcagcgcgtcg
cgcaagaggccgatggtgatcgagggcgagctggtggccaaatccaccggcatcgaatcc
gacttctcgttggacgaccgcgtcttccatcagaaattcggctacggccgcgtcaccaag
atcgacggcaacaagctcaccatcgccttcgacaaggccggcgagaagaaggtcgtcgac
agtttcgtggagcgcgcctga
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