Rhodopseudomonas boonkerdii: E0H22_09330
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Entry
E0H22_09330 CDS
T07799
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rbk
Rhodopseudomonas boonkerdii
Pathway
rbk00061
Fatty acid biosynthesis
rbk00071
Fatty acid degradation
rbk01100
Metabolic pathways
rbk01212
Fatty acid metabolism
rbk02024
Quorum sensing
rbk04146
Peroxisome
Module
rbk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rbk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E0H22_09330
00071 Fatty acid degradation
E0H22_09330
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E0H22_09330
09145 Cellular community - prokaryotes
02024 Quorum sensing
E0H22_09330
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rbk01004
]
E0H22_09330
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rbk04147
]
E0H22_09330
Enzymes [BR:
rbk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E0H22_09330
Lipid biosynthesis proteins [BR:
rbk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E0H22_09330
Exosome [BR:
rbk04147
]
Exosomal proteins
Exosomal proteins of breast milk
E0H22_09330
Exosomal proteins of breast cancer cells
E0H22_09330
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF764
SH3_1
Motif
Other DBs
NCBI-ProteinID:
UGV25871
LinkDB
All DBs
Position
complement(2018724..2020652)
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AA seq
642 aa
AA seq
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MMDYAGRVRQADTYPKLLRLNAREHGNEIALREKDFGLWREFTWNDYHNRVKDFALGMVE
LGIGKGDVIGIIGDNRPDWVSAEIAAHAIGGMSLGLYRDVLDEEAAYLLNYGEAKIVFAE
DEEQVDKLLTLADRVPALKHIVYSDPRGMRKYNDPRLLEADSLAQMGRDRASREPGLYDQ
MVDATFGEDVAILCTTSGTTSNPKLAMLAVGRVLGHCAVYLSFDPKGPDDEYVSVLPLPW
IMEQVYALGKGLLSRMKVNFVEQQDTMMNDFREIAPTFVLFAPRVWEGIAADVRARVMDA
SPLKQSLYELGMKTGLNALANGKRSTVADMLLFRALRDRLGFTRLRSAATGGAALGPDTF
KFFRAMGVPLRTLYGQTETLGAFTLHAPDAVDPDTTGIAMGDGIQIEVRDPDSQGVGEIV
VRHPNMFLGYYKNPEATGADLRDGWMHSGDAGYFNDAGQLVVIDRIKDLAETARGERFSP
QYIENKLKFSPYVAETVVLGAGRDALAAMICIRYSIISKWAEKNRLAFTTYTDLSSRPEV
YALLQKEVEAVNATLPPAQRISRFLLLYKELDADDGELTRTRKVRRSVINEKYADIIDSI
YGGRSEIPVDTTIRFQDGTSQRIRTKLKVVDMRDAARMEAAE
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatggattatgccggccgcgtcagacaggcggacacctatccaaagcttttgcgcctc
aacgctcgagagcacggcaacgagatcgcgttgcgcgagaaggatttcggcctctggcgt
gaattcacctggaacgactaccacaaccgggtgaaggattttgcgctcggtatggtcgag
ctcggcatcggcaaaggcgatgtcatcggcatcatcggcgacaaccggcccgactgggtc
tccgccgagatcgccgcccacgccatcggcggcatgagcctcggcctctatcgcgacgtg
ctggatgaggaagccgcctatctcctcaattacggcgaagcgaagatcgtcttcgcagaa
gacgaggaacaggtcgacaagcttctcacgctcgccgaccgcgttccggcactgaagcac
atcgtctatagcgatccgcgcggcatgcggaaatataacgatcctcgtttgctggaagcc
gacagtttggcacagatgggccgcgaccgcgcatcgcgcgaacccggcctttacgaccag
atggtcgacgccaccttcggcgaggatgtcgccatcctctgcacgacgtcgggcaccacg
tcgaaccccaagctcgccatgttggctgtcggccgcgtgctcggccattgcgcggtgtat
ctctcgttcgaccccaaggggccagatgacgaatatgtctcggtgctgccgctgccctgg
atcatggaacaggtctatgccctcggcaaaggcctgctgtcgcggatgaaggtcaacttc
gtcgagcagcaggacaccatgatgaacgattttcgcgagatcgctccgaccttcgtgctg
ttcgcaccacgcgtctgggaaggcatcgcggccgatgtccgtgccagggtgatggatgca
tcgccgctgaagcagagcctgtatgagctcggcatgaagaccgggctcaatgcgcttgcc
aatggcaagcgctcgaccgttgccgacatgctgctgttccgcgcgctacgcgaccgtctc
ggcttcacgcgcctgcgctcggctgccactggtggcgccgcgctcgggccggacacgttc
aaattctttcgcgcgatgggcgtgccgctccgcaccttgtatggccagaccgaaacgctc
ggcgccttcacgctacacgcgcctgacgccgttgatcccgacaccaccggcatcgccatg
ggcgatggcatccagatcgaggtgcgcgatcccgacagccagggtgtcggcgagatcgtg
gtgaggcaccccaatatgttcctcggctattacaagaacccggaagccaccggcgccgat
ctacgcgacggctggatgcattcgggcgacgccggttatttcaatgacgccggacaactc
gtggtgatcgaccgcatcaaggatctcgcagagaccgcgcgcggcgagcgcttctcgccg
caatatatcgaaaacaagctgaaattttcgccttatgtggccgagaccgtggtgctcggc
gcgggccgtgacgccttggccgctatgatctgcatccgctattcgatcatctcgaaatgg
gccgagaagaaccggctggccttcacgacctacaccgacctctcgtcgcgccccgaggtc
tatgcgttgctgcagaaggaagtcgaagcagtcaacgccacgctgcctcccgcacaacgc
atctcgcgatttctgctgctctacaaggagctcgacgcagacgacggcgaactgacgcgg
acgcgaaaggttcggcgcagcgtgatcaacgagaaatatgccgacatcatcgacagcatc
tatggcggccgcagcgaaatcccggtggacaccaccatccgttttcaggacggcacatcg
cagcgcatccggacgaagctgaaggtggtggatatgagggatgcagcgcggatggaggcg
gcggaatga
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